| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2080 |
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| Symbol | |
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| ID | 7400600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2067295 |
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| End bp | 2067897 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643709151 |
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| Product | Bacterio-opsin activator HTH domain protein |
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| Protein accession | YP_002566728 |
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| Protein GI | 222480491 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.231925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.169776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGAAG CCGCAGAGGA CGGGCGCCGA CTCCGCGTCG ACCTCGACAT CGATCCGAGC
GACGACTGGG AGTGTCCCAT CGTCTCCGAG ACTCCCGACG CGAGCGCCGT GGCCGTCAAC
GCGGTGGGTC ACGAGTGCAC CGTCGACGTG CAGCCGACCG GCGACGACGG GCTCGTGCGC
GCTCGCGGCG AGGTCTCCGA CGACTGCCTC TGTCGGATCT TCCAAGGGTT CGGCTGCGTC
CCGCACGTCC GGCGGGTCGA AGACGGGACG ATGCTCGTGA CCACCTACGT CGACGACCGA
GAGACGGTCC GCGACGTGGT CGGTGCGCTC AGGGAGGCCC TCGATCACGT CAGACTGGTC
CGACTCGCGG TCGTCGAGGG GCCGGAGGCG ACCGAGCAGG TGACCTTCGA CCTCTCCGCG
CTCACCCCGA AACAGCGGGA GGGGCTCGAA CTCGCGGTGG TCCGCGGCTA CTTCGACAAC
GACCGAAACG TGGAGCTCGG CGATCTGGCC GCCGAGATAG AGATTAGCAA GTCCGCGCTC
TCACAGCGGC TCCGGGCCGC TCAAGCGAAG CTCGTCACCG ACGTGTTCGA CGAGGTCGAG
TGA
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| Protein sequence | MAEAAEDGRR LRVDLDIDPS DDWECPIVSE TPDASAVAVN AVGHECTVDV QPTGDDGLVR
ARGEVSDDCL CRIFQGFGCV PHVRRVEDGT MLVTTYVDDR ETVRDVVGAL REALDHVRLV
RLAVVEGPEA TEQVTFDLSA LTPKQREGLE LAVVRGYFDN DRNVELGDLA AEIEISKSAL
SQRLRAAQAK LVTDVFDEVE
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