Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_2063 |
Symbol | |
ID | 7400583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 2052686 |
End bp | 2053708 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643709134 |
Product | undecaprenyl diphosphate synthase |
Protein accession | YP_002566711 |
Protein GI | 222480474 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00929872 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.185257 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAATC GTCTCCGCGT GCTTACCGAG CGCGCGTACC GCCGGCACCT CCATCGAGAG ATCGAGGACG TACCGACACA CGTCGCGATC ATCCAGGACG GAAATCGGCG GTACGCCCGG GAGCGCGGCG ACAACGCGCC CGACGGCCAC CGGGCCGGCG CCGCTACCAC CGAGCGCGTC CTCGACTGGT GCGCGGATTT GGGCGTCGCA GAGCTGACGC TGTACGCCTT CTCGACCGAG AACTTCGAGC GCCCGGACGA GGAGTTGGAG CCGCTGTTCG ACCTGTTGGA GACCAAGCTC CGCGACTTCG CCGACGCCGA CCGCGTCCAT GAGCAGGGAG TCCGCGTTCG CGCAATCGGC GATGTCGACC GCCTCCCGGA GCGCGTGCGC GACGCGGTGG ACTACGCAGA GCGCCGCACC GCCGACAACG ACCGGTTCAC GCTGAACGTC GCGCTGGCGT ACGGTGGCCG CACCGAACTG CTCGACGCGG CGACGGCGAT CGCACGCGAC GTCGATGCGG GCGACCTCGA CCCGACCGAT GTCGACGTCG AAACCGTCGA GGAGCGGCTG TACGATCGAC CGGTCCGCGA CGTCGACCTG ATCGTCCGGA CCGGCGGCGA CGAGCGCACC TCGAACTTCC TCCCGTGGCA CGCCAACGGC AACGAGGCGG CCGTCTACTT CTGTGCGCCG TACTGGCCGG AGTTCTCGGA GGTGGAGTTT CTCCGTGCCA TCCGCACGTA CCAGTCGCGC GAGGAGTCGT GGCGGCAGGC CCGGGCGGAG CGGGCGGTCG CGCTCGTTCG GGCGGTCGCC GAGGTGGAAA TCGCCGAGGC GCACGCGGTG GCGGGGCGAC TCCGCGACCG GCTCCCGCTC GACGCCGACG CGCTCGCTGC CGCACTCCCG GGCGACGACG AGGACGCGGT CGAGGATAGG TCTGAAGACG GATCCCCGCC CGAAACCGCA ACCGAGAACG CGGGCCAAAC TCCGACCGGA GAACGCGACG CAGAGCCGGA GTCGGCGGAC TAA
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Protein sequence | MLNRLRVLTE RAYRRHLHRE IEDVPTHVAI IQDGNRRYAR ERGDNAPDGH RAGAATTERV LDWCADLGVA ELTLYAFSTE NFERPDEELE PLFDLLETKL RDFADADRVH EQGVRVRAIG DVDRLPERVR DAVDYAERRT ADNDRFTLNV ALAYGGRTEL LDAATAIARD VDAGDLDPTD VDVETVEERL YDRPVRDVDL IVRTGGDERT SNFLPWHANG NEAAVYFCAP YWPEFSEVEF LRAIRTYQSR EESWRQARAE RAVALVRAVA EVEIAEAHAV AGRLRDRLPL DADALAAALP GDDEDAVEDR SEDGSPPETA TENAGQTPTG ERDAEPESAD
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