Gene Hlac_2052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2052 
Symbol 
ID7402071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2043539 
End bp2044447 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content70% 
IMG OID643709123 
Productmethionine aminopeptidase 
Protein accessionYP_002566700 
Protein GI222480463 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00501] methionine aminopeptidase, type II 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.121008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACG GATCCCTAGA CGACGACGCG GTCGAGAGCT ACCGGGAGGC GGGTGCGGTG 
TTGGTCGAGG CGATGAACGA GGCCCGCGAG ATGGTCGAGC CGGGGCGGAC ACACCTCGAG
GTCGCGGAGT GGACGGAGGA CTTCATCCGC GAGCAGGACG CGGGGCTCGC GTTCCCCGTC
AACATCAGCG TCGATCCCGA GGCCTCTCAC GCCACCCCGA GTCGCGACGA CGACACCGAG
TTCGGCGAGG AGATGGTGTG TCTCGACGTC GGCGTCCACG TCGACGGCTA CATCGCCGAC
GCCGCGGTCA CGGTGGACCA CACGGGGACC CCCGAGCTGG TCGAGGCCGC CGAGATGGCG
CTCGAGGCCG CGGTCGACGA GGCCGGGCCG GGTGTCGAGG TCGGCGTCGT CGGGCAGGCG
ATCGAGGACG TGATCCGCGG GTACGGCTAC ACGCCCGTCC TGAATCTCTC CGGACACGGC
GTCGAGCGCT ACGACGCGCA CACGGGGCCG ACGGTCCCGA ACCGCGGCGT CGATCGGTCG
GTCGAACTGG AGCCCGGACA GGCGGTTGCG ATCGAGCCGT TCGCCACCGA CGGCCGCGGG
AAGGTCGGCG AGGGGACCGA GGAGGAGATT TTCGAGCGAC AGGGGTCGGG GAGCGTCCGC
GACCGCCGCG CGCGACAGGC CCTCGACGAG ATCGAGGCGT TCGACGACCT CCCGTTCGCG
GCGCGGTGGC TGGAAGGCGA CCGCGTAGAG ATGGCACTGC GCCGGCTGAA GCAGGCGAAC
GCGGTGAAGG GATACCCCGT CCTGAAGGAG GCCGACGACG CGCTCGTCAG TCAGGCGGAA
CACACCCTGC TCGTCACCGA CGACGGCGTC GAGATCACGA CCGCCGGCAT CCACGACTTC
GACGGCTGA
 
Protein sequence
MSHGSLDDDA VESYREAGAV LVEAMNEARE MVEPGRTHLE VAEWTEDFIR EQDAGLAFPV 
NISVDPEASH ATPSRDDDTE FGEEMVCLDV GVHVDGYIAD AAVTVDHTGT PELVEAAEMA
LEAAVDEAGP GVEVGVVGQA IEDVIRGYGY TPVLNLSGHG VERYDAHTGP TVPNRGVDRS
VELEPGQAVA IEPFATDGRG KVGEGTEEEI FERQGSGSVR DRRARQALDE IEAFDDLPFA
ARWLEGDRVE MALRRLKQAN AVKGYPVLKE ADDALVSQAE HTLLVTDDGV EITTAGIHDF
DG