| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2051 |
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| Symbol | |
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| ID | 7402070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2041216 |
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| End bp | 2043462 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643709122 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002566699 |
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| Protein GI | 222480462 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.167205 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCGG TATCGATGGT GTGGCAACCG ACGCCGTACA CGGTTCCGCT GCTCGTGGCA
GCGCTCGCGT CGTTCTCTTT CGCCGTGTAC GCTGTCCGGA ACCGGTCGCG GGGAGAGATA
CCGCTCGTAC GGAGCTTCGT TGGTGTCACG GTCAGTAGCG GGGTCTGGTC GCTGGCGTAC
GCGGCGCAGC TGTCGGCGAC GACGCTCGAA GCGACCCTGC TGTGGAACCG CCTCGTCTGG
GTCGGAGTCG CAGCGCTCAC CGTCGCCTGG CCCGTGTTCG TGTTCGTCTA CGTCGACTGG
ACGGCGTGGA TTCGACCGCG CCGCATCGCC CTGCTGTGTC TCGTCCCCGC GACCGCCGTC
GGCGGCATCT TCGTCGTCGG CGCCGACCCG ATTTTTTACA CGTCTCCGTC GCTGTCCGAT
ACGAACGGGT TCCTCGTGAT GGAGTACCTG CCGACGCCCG CGCTCTTGGG GTTCATGACG
TACGCTTACG CCGTGAACCT GTTTACCTTC GCCGTGCTCG GCTACGCCGC GCTCGCCCGC
GACGGCGTGT TCCGTCGGCA GGCCGCGCTG CTGCTCGCCG CCGGTGTCGC ACCGATGACC
GTCGGCGTCA TCGGGATCTG GGGGCTGATC GGCCCCCGGT TCGTCGACCT CACGCCGGTC
ACGTTCGCGG CCACCTCCGG TCTGCTCGGC TGGGTCGTAT TCCGCTACCG GCTCCTCGAC
CTCTCGCCCA TCGCTCGCGA CGCGGTGTTC GCAAACCTTT CCGATGGTAT CGTAGTCGTC
GACGACGCCG GTCGCGTCGT CGACCTGAAC CGGCCGGCTC GTCGACTGTT CCCGTCCGCG
GCGATCGGCT GCGGCGTCGA CGAGGCGTTC GAGCGCGCCC CGGCGGTCAC GGATCTCGTG
TCGCGCGACG GGACTGTCGA CGGGGCCGGG TCGCGTGGCA CCCCCGGAGC GGACCCGGAC
GACGATCTCC GGGTGACCGT CGACGGTGGG TCAGATCCCC GCTTTCTGAC GGTCGCCGCC
CACTCGATCG CCGGGGGCGG GTCCGGGGCC GGGGTCGAAT CCGAGTTCGA GAGCCCGCCC
GAATTCGGGT CCACCTCCGC GGCGGGCGGA ACCGTCCTCC TGTTTCGCGA TGTCACCGAG
CGCGAGACGC TCCAGCGCCG TTACCGGGCG CTCATCGAGA AGTCACCGAA CATCATCGCC
GTCTGCGGAA CCGACGGCCT GCTCCGGTAC GTGAGCCCGT CGATAGAGCG TCTGCTTGGC
CACTCGCCTG CGGAGATCGA GGGGCGGCCC GTGATCGACT TGGTCCACCC CGACGACCGT
CGGGAGGCGC AACGCGCGTT CGAGTGCGCG TTCGAGACCG GCGAGCCGCA GGCGATCGAC
CACCGGATAG CCCACGCAGA CGGAAACTGG CGCCAGTTCG ACACGAGGGT CGAGCGCCTG
TTCGAGGACA CCGAAGAGGT GGTGATAACC GCCACCGATG TGACCGAGAT CCGACGGTCC
GAACAGCGGC TACAGGTCCT CAATCGGGTT CTCAGACACG ATCTGAAGAA CGACACGAAC
GTTATCGGCG GATACGCGAA CCTCCTCCGA AACCATGTCG ACGAGGAGGG CGACGACTAC
CTCGACATCA TCGATCGGAA GGTCGAGACG CTGACACACC TCAGCGACCA AGCCCGCGAG
ATCGACGTCG CGCTCCACAG GGACGGCGCG CGGGCGGAGA TCGACCTGTC GGAACTGGTC
ACGCGACTCT GCGAGTCGCT CGAGTCGTCG TTCCCGCGGG CGACGGTGAC GGTGTCGACG
CCCGGCGCGG CCGTGGTGTG TGCCGACGAG CTGTTGGAGT CCGCGGTCCG GAACGTGTTG
GAGAACGCGG TCGTCCACAA CGACGGGGAC CAACCGATCG TCGAGGTGGC CGTCGATCCG
GACGGCGAGG GGTACCGCAT CGCCGTCGCG GACAACGGCC CCGGGATCCC CGCGGTCGAG
CGGAGCGTGT TCTCGGAGGC CCGCGAGACG GCGCTCGAAC ACGCGAGCGG GCTGGGGCTC
TGGCTCGTCC ACTGGATCGT CACCGAGTCC GGCGGCGAAC TGGAGATCCA CACGCGAGAG
CCGACGGGAA CGCTGATCAC GATGTGGCTT CCGACGGCAA ACGGAGAGGC GGCGAAGGCT
AGGGAGGCGG TGGCCAATGG CGAGGCAGCG GCCGACGCCG AGGCGGCGTC GGCGAGCAGC
GATCCGAGCC CCGACCCCGC GCCGTGA
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| Protein sequence | MHPVSMVWQP TPYTVPLLVA ALASFSFAVY AVRNRSRGEI PLVRSFVGVT VSSGVWSLAY
AAQLSATTLE ATLLWNRLVW VGVAALTVAW PVFVFVYVDW TAWIRPRRIA LLCLVPATAV
GGIFVVGADP IFYTSPSLSD TNGFLVMEYL PTPALLGFMT YAYAVNLFTF AVLGYAALAR
DGVFRRQAAL LLAAGVAPMT VGVIGIWGLI GPRFVDLTPV TFAATSGLLG WVVFRYRLLD
LSPIARDAVF ANLSDGIVVV DDAGRVVDLN RPARRLFPSA AIGCGVDEAF ERAPAVTDLV
SRDGTVDGAG SRGTPGADPD DDLRVTVDGG SDPRFLTVAA HSIAGGGSGA GVESEFESPP
EFGSTSAAGG TVLLFRDVTE RETLQRRYRA LIEKSPNIIA VCGTDGLLRY VSPSIERLLG
HSPAEIEGRP VIDLVHPDDR REAQRAFECA FETGEPQAID HRIAHADGNW RQFDTRVERL
FEDTEEVVIT ATDVTEIRRS EQRLQVLNRV LRHDLKNDTN VIGGYANLLR NHVDEEGDDY
LDIIDRKVET LTHLSDQARE IDVALHRDGA RAEIDLSELV TRLCESLESS FPRATVTVST
PGAAVVCADE LLESAVRNVL ENAVVHNDGD QPIVEVAVDP DGEGYRIAVA DNGPGIPAVE
RSVFSEARET ALEHASGLGL WLVHWIVTES GGELEIHTRE PTGTLITMWL PTANGEAAKA
REAVANGEAA ADAEAASASS DPSPDPAP
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