Gene Hlac_2050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2050 
Symbol 
ID7402069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2040684 
End bp2041151 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content66% 
IMG OID643709121 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_002566698 
Protein GI222480461 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.163513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAC CGGGCGATCC CGCACCCGCG ATCGCACTGT CCGACCAGCA CGGCGACGCC 
GTCACTGTCG ACCCCGCCGC GGCGCGCTAC ACGGTCGTCT ACTTCTACCC CCGCGCCGAC
ACGCCGGGAT GTACGACCGA GGCCTGTAGC TTCCGCGACG AGTGGGACGC CTTTGAGGGC
GCCGACGTCG CGGTCGTCGG GATCAGCGAC GACTCCGTCG GCGACCTCGA ACCGTTCGCC
GAGGAGTACG ACCTGCCGTT CACGCTGCTT TCCGACCCCG ACGGCGAGGT CGCGAGCGCC
TACGACTCGT ACGGCGAAAA ACAGATGTTC GGTAACACTT TCGACGGTGT GTTCCGGAAC
ACGTACGTGA TCGACGCAGA CGGGACGATC GCGCTCGCCT ACGAGGGCGT TTCCCCCGAG
AACCACGCGG TCGAGATCCT CGACGACATC GACGTACTGG ACGGCTGA
 
Protein sequence
MLEPGDPAPA IALSDQHGDA VTVDPAAARY TVVYFYPRAD TPGCTTEACS FRDEWDAFEG 
ADVAVVGISD DSVGDLEPFA EEYDLPFTLL SDPDGEVASA YDSYGEKQMF GNTFDGVFRN
TYVIDADGTI ALAYEGVSPE NHAVEILDDI DVLDG