Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_2046 |
Symbol | |
ID | 7402065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 2036668 |
End bp | 2036910 |
Gene Length | 243 bp |
Protein Length | 80 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643709117 |
Product | Like-Sm ribonucleoprotein core |
Protein accession | YP_002566694 |
Protein GI | 222480457 |
COG category | [K] Transcription |
COG ID | [COG1958] Small nuclear ribonucleoprotein (snRNP) homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0600722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0639389 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGAC GACCCCTCGA CGTGCTCGAA GCGTCGCTCG AGGAGCCGGT GACGGTTCAC CTGAAGGACG GGACGACCTA CTACGGCATC CTCGCCGGCT ACGACCAGCA CATGAACATC GTCATCGAGC CCGAGACCGA CGTAGACGAT CGCGTCGACG ACGATCTCGA CGGCGAGTTC GCCGTCGCAA TCGAAGACAC AACGATTATA CGCGGCGATA ACGTCGTCAC CATCAAAGCA TGA
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Protein sequence | MSGRPLDVLE ASLEEPVTVH LKDGTTYYGI LAGYDQHMNI VIEPETDVDD RVDDDLDGEF AVAIEDTTII RGDNVVTIKA
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