| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2046 |
|---|
| Symbol | |
|---|
| ID | 7402065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 2036668 |
|---|
| End bp | 2036910 |
|---|
| Gene Length | 243 bp |
|---|
| Protein Length | 80 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643709117 |
|---|
| Product | Like-Sm ribonucleoprotein core |
|---|
| Protein accession | YP_002566694 |
|---|
| Protein GI | 222480457 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1958] Small nuclear ribonucleoprotein (snRNP) homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0600722 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0639389 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGGAC GACCCCTCGA CGTGCTCGAA GCGTCGCTCG AGGAGCCGGT GACGGTTCAC
CTGAAGGACG GGACGACCTA CTACGGCATC CTCGCCGGCT ACGACCAGCA CATGAACATC
GTCATCGAGC CCGAGACCGA CGTAGACGAT CGCGTCGACG ACGATCTCGA CGGCGAGTTC
GCCGTCGCAA TCGAAGACAC AACGATTATA CGCGGCGATA ACGTCGTCAC CATCAAAGCA
TGA
|
|---|
| Protein sequence | MSGRPLDVLE ASLEEPVTVH LKDGTTYYGI LAGYDQHMNI VIEPETDVDD RVDDDLDGEF
AVAIEDTTII RGDNVVTIKA
|
|---|
| |