Gene Hlac_2027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2027 
Symbol 
ID7402046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2019815 
End bp2020750 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content72% 
IMG OID643709098 
Productpeptidase S15 
Protein accessionYP_002566675 
Protein GI222480438 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.501878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGCA GAGACCCGGT GAACCGTGCC CAGCGGCGGC TCGACCGGCC GCCGCGCGAG 
CGGTTCGCCA CCCGCGAGCT CGCGTTCGAC GCCGACGGCG ACACCTGTCG CGGCACGCTG
TATCTCCCCG GCGGCGACGA TGAGGACTCG CCAGTCGTCG TGATGGCACC GGGGCTCGGC
GCGGAGCGGA GCTTCGGCTA CCCGGCGGTG GCGGAGCGGT TTGCCGACGC CGGCTACGCG
GCGTTCCTCT TCGATTACCG CGAGTTCGGG GCCTCAGACG GCGACTCGCA GGTCGTCGAT
CCCGCCGGCC AGCGCGCGGA TTACGCGGCC GCGATCGACC GCGTCCAACG AGTCGACGCG
ATCGGTCGCG AGCTGGTCCT CTGGGGCGCG TCGCTGTCGG CTGCACACGT CCTCACGCTC
GCGGCGGAGC GGCGCGACGT CGACGCCGTG ATCGGCGCGG TCCCGATGCT CGACGGGCGA
GCGATCGCCC GGCGCCGAGG CGTGAAGTAC CTCGCGCGCT CCGGGGTCGC GGGCGTCCGC
GACCTGCTCG GCCACCGGGT CGGTCGCGGG CGGACCGTCC CGATCGTTGG TACCACCGAG
GAGTTGGCCG CGATCACGGA GCCGGGGACG AAGCGGAAGT ACCTCGATCT GGTCGACCGG
GAGTCGACGT GGCGCAACGA GACGCCCGCG CGGTCCCTGC TGCGGGTGGC GAGCTATCGC
CCGGTCGAAC AGCTCGACGA GATCCGAGCG CCGACACTGC TTCTGGCCGG CACCCACGAC
GCCATCGTCG ACAGCGAGGC GGTCGTCGAC GCGGGCGAGA CGCTGTCGCG CGGGACCGTC
GTCACCATGC CCGCGGACCA CTTCTCCCCG TTCGGCGAGG ACTTCGAGCC GGCAGTTGGT
CATCAGCTTT CCTTCTTGCG GGACGCGCTC GACTGA
 
Protein sequence
MTRRDPVNRA QRRLDRPPRE RFATRELAFD ADGDTCRGTL YLPGGDDEDS PVVVMAPGLG 
AERSFGYPAV AERFADAGYA AFLFDYREFG ASDGDSQVVD PAGQRADYAA AIDRVQRVDA
IGRELVLWGA SLSAAHVLTL AAERRDVDAV IGAVPMLDGR AIARRRGVKY LARSGVAGVR
DLLGHRVGRG RTVPIVGTTE ELAAITEPGT KRKYLDLVDR ESTWRNETPA RSLLRVASYR
PVEQLDEIRA PTLLLAGTHD AIVDSEAVVD AGETLSRGTV VTMPADHFSP FGEDFEPAVG
HQLSFLRDAL D