Gene Hlac_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2022 
Symbol 
ID7402041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2015878 
End bp2016324 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content67% 
IMG OID643709093 
Productprotein of unknown function DUF101 
Protein accessionYP_002566670 
Protein GI222480433 
COG category[S] Function unknown 
COG ID[COG1371] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.367905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACA CCCTCCGCGA GCACACGGCC GACATCGCGG TCGAGGCGAC CGCGCCCACC 
CTCGCGGCGC TGTTCGAGTC GGTCGGCGAC GGCCTCACCG CCGCGAGCTG CGAGACGATC
GCCGAGGGCG GGGATCGGTT CGAGTTCACC GTGACCGCCG AAAGCCGCGA GGCGCTCCTC
TTCGACTACC TCGACCAGCT GATCTACGAA CGCGACGTGC GGCTCGTCCT CCCCGCCGAT
CACCGGTGTA CGATCGCGGA ATCTGATGAT CCCGAATCTG ATGACTCCGA ATCGAACGAC
GAAGCGATGT GGACGGTCGA GGTAACGGCC CGCGGCGTCC CCCTCGACGC CGTCGCCGCC
CGGGAGATCA AGGCTGTCAC CTACTCCGAG ATGGTCCTCG ATCGTCGGGG CGGCGAGTGG
TACGCGTACG TCGTTTTCGA CGTGTGA
 
Protein sequence
MSYTLREHTA DIAVEATAPT LAALFESVGD GLTAASCETI AEGGDRFEFT VTAESREALL 
FDYLDQLIYE RDVRLVLPAD HRCTIAESDD PESDDSESND EAMWTVEVTA RGVPLDAVAA
REIKAVTYSE MVLDRRGGEW YAYVVFDV