Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_2011 |
Symbol | |
ID | 7402030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 2004708 |
End bp | 2005931 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643709082 |
Product | proteasome-activating nucleotidase |
Protein accession | YP_002566659 |
Protein GI | 222480422 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.705003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCATA GCCCCTCACT GCCCGACCGT CCTCGTCTGG AACTCGATCC GGAGATGAGC GAGACGGAGC GGCTCGAGGC GATCCGCCAG CACTACCGGC GGATACTGCA GGTGAACGAT GAGCTCGAGG ACCGACTTGA TGACGCGCAG GACCGGCGCG GCGAACTCAA GTCGGACGTG GACGGGCTGA AACGCGAAAA CGAGGTGCTG AAGACCACCT CGCTGTACAT CGCCTCCGTC GAGGAGATCA CCGATGACGG AGTAGTCATC AAACAGCACG GCAACAACCA GGAGGTGCTG ACGCAGGCGT CCACGACGCT TGAGTCCGAC CTCCGGCCCG GCGACCGCGT CGCGAACAAC GATTCCTTCG CGGTCCAGCA GGTGCTCGAC GACGAGACCG ACTCCCGGGC GCAGGCGATG GAGGTCACCG AGTCCCCGGA CGTCACCTAC GACGACATCG GCGGCATCGA CGACCAGATC CGCGAGGTCC GCGAGGCCGT CGAGGACCCG CTCGAAGACC CCGAGCAGTT CGAGGCGGTC GGCGTCGATC CGCCGAGCGG TGTCCTCCTG CACGGCCCGC CGGGGACTGG GAAGACGATG CTGGCGAAGG CGGTCGCCAA CGAGTCCGAC GCCACCTTCA TCAAGATGGC CGGCTCCGAA CTGGTCAGGA AGTTCATCGG CGAGGGCGCC CGACTCGTCC GTGACCTGTT CGAGCTCGCT GGCGAACGCG AGCCCGCTGT CATCTTCATC GACGAGATTG ACGCCGTCGC CGCCAAGCGG ACGGACTCGA AGACGTCGGG CGACGCCGAG GTTCAGCGCA CGATGATGCA GTTGCTCTCC GAGATGGACG GCTTTGACGA CCGCGGCGAG GTCCGGATCA TGGCCGCCAC GAACCGCTTC GACATGCTCG ACGAGGCGAT CTTGCGTCCG GGGCGCTTTG ACCGCCTCAT CGAGGTGCCG GAGCCGAACG CCGAGGGTCG CGCGCGCATT TTGGAGATCC ACACGCAGGA CATGAACGTC GCCGAAGGGA CGGACGTGAG CGAGGTCGCG GCCGACCTAG AGGGATACAG CGGCGCCGAC ATCGCCTCGC TGGCGACCGA GGCCGGGATG TTCGCGATCC GCGACGGTCG CACCGAGGTC ACGCAAGCGG ACTTCGAGCA GGCGCGCGAG AAGTTGCAGG ACGCCGAGAA GACCGAAGAG CAGGTCATCA ACTACCAGTA CTAG
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Protein sequence | MSHSPSLPDR PRLELDPEMS ETERLEAIRQ HYRRILQVND ELEDRLDDAQ DRRGELKSDV DGLKRENEVL KTTSLYIASV EEITDDGVVI KQHGNNQEVL TQASTTLESD LRPGDRVANN DSFAVQQVLD DETDSRAQAM EVTESPDVTY DDIGGIDDQI REVREAVEDP LEDPEQFEAV GVDPPSGVLL HGPPGTGKTM LAKAVANESD ATFIKMAGSE LVRKFIGEGA RLVRDLFELA GEREPAVIFI DEIDAVAAKR TDSKTSGDAE VQRTMMQLLS EMDGFDDRGE VRIMAATNRF DMLDEAILRP GRFDRLIEVP EPNAEGRARI LEIHTQDMNV AEGTDVSEVA ADLEGYSGAD IASLATEAGM FAIRDGRTEV TQADFEQARE KLQDAEKTEE QVINYQY
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