| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1997 |
|---|
| Symbol | |
|---|
| ID | 7402016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 1991696 |
|---|
| End bp | 1992733 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643709068 |
|---|
| Product | putative deoxyhypusine synthase |
|---|
| Protein accession | YP_002566645 |
|---|
| Protein GI | 222480408 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1899] Deoxyhypusine synthase |
|---|
| TIGRFAM ID | [TIGR00321] deoxyhypusine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.428923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.191458 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA GCGACGACGG GGGCGACCCG CCGCACGAGG AGTTCCACGA GGACCCGGTC
GGACACACCC GCGCGACGGC CGGGATGACC GTCGGGGAGC TGGTCGAGGG GTACGGCGAC
GCGGGGATCG GCGCAGCGTC GGTCAACGAG GCGGGCGACG TGCTCGCAGA GATGTTCGCG
AACGACGACT GCACCGTGTT CCTCTCGCTG GCGGGCGCGA TGGTGCCCGC GGGGATGCGC
CGGATCGTCT CCGATCTCAT CCGAGACGGC TACGTCGACG CGCTGGTGAC GACGGGCGCG
AACCTCACCC ACGACGCCAT CGAGGCCATC GGCGGGAAAC ACCACCACGG TCGGACCCAC
GACCCCGAGA AGAGTCTCCG CGAGCACGAC GAGGGGCTCC GCGACGAGGG CGTCGACCGC
ATCTACAACG TCTACCTCCC GCAGGAGCAT TTCGCGGCCT TCGAGGGTCA CCTGCGCGAG
GAGGTGTTCC CGGCGCTCGA AGCCGATCCG GACGACGACG GAAACGGCGC CGTCGGCATC
GCAGATCTCA CACGCGAGCT CGGACGCGCC AACGCCGCGG TTAACGAACG CGACGACGTG
GCCGAGGACG CCGGCGTCGC CGCCGCGGCC TACGAGTGCG ATGTGCCCGT CTACTGTCCC
GCCGTGCAGG ATTCCGTGCT CGGGTTACAG GCGTGGATGT ACGCCCAGAC TGCCGACTTC
ACGCTCGACG CCTTAGACGA CATGACGGAA CTGACCGACC TCGCGTTCGA CGCCGACGAC
GCCGGCTGCC TGCTTGTCGG CGGCGGCGTC CCGAAGAACT TCACGCTCCA GACGATGCTC
GTCACGCCCC GCGCCTACGA CTACGCCGTT CAGATCACGA TGGACCCGGA GGCGACCGGC
GGGCTCTCCG GTGCCACCTT AGAGGAGGCT CGGTCGTGGG GGAAACTGGA GAAGGACGCG
CGCAACGCCT CCGTCTACGG CGACGCGACC GTTATGCTGC CGATGCTTAT TGCTGCCGCC
CGCGAGCGCG TGGAGTAG
|
|---|
| Protein sequence | MSDSDDGGDP PHEEFHEDPV GHTRATAGMT VGELVEGYGD AGIGAASVNE AGDVLAEMFA
NDDCTVFLSL AGAMVPAGMR RIVSDLIRDG YVDALVTTGA NLTHDAIEAI GGKHHHGRTH
DPEKSLREHD EGLRDEGVDR IYNVYLPQEH FAAFEGHLRE EVFPALEADP DDDGNGAVGI
ADLTRELGRA NAAVNERDDV AEDAGVAAAA YECDVPVYCP AVQDSVLGLQ AWMYAQTADF
TLDALDDMTE LTDLAFDADD AGCLLVGGGV PKNFTLQTML VTPRAYDYAV QITMDPEATG
GLSGATLEEA RSWGKLEKDA RNASVYGDAT VMLPMLIAAA RERVE
|
|---|
| |