Gene Hlac_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1988 
Symbol 
ID7402007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1982980 
End bp1983354 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content64% 
IMG OID643709059 
Productsuccinate dehydrogenase, subunit D (membrane anchor protein) 
Protein accessionYP_002566636 
Protein GI222480399 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.323826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.457032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGC GTTACTCCTC GTTCAACTCC GGCGGTCGGA TGTGGCTGCT CCAGCGCGTC 
ACGGCGGCGT TCCTACTGAT CGTGCTGGCG TTCCACTTCT TCCTGCTCCA CTTCGTCCAC
CACGCGGACG AGGTCACGCT CGCGGCCAGC TCGGCGCGGA TGGAGCAGCT GAGCTACTAC
TCGCTAATGG TGCTGTTCCT CGTAACGGCG ACGTTCCACG GGGTCAACGG CGTATACAAC
GCCCTCATCA ACCAGGGGCT GACCGGCACC AAACGCACGG TCGTCAAGTG GACGCTCGTA
GCCGCGAGCG TCGTGCTGCT GTTCCAGGGG ATTCGGACGG CGAACGCGTG GGCGGGCGGC
TTCCCACTGC TCTGA
 
Protein sequence
MAERYSSFNS GGRMWLLQRV TAAFLLIVLA FHFFLLHFVH HADEVTLAAS SARMEQLSYY 
SLMVLFLVTA TFHGVNGVYN ALINQGLTGT KRTVVKWTLV AASVVLLFQG IRTANAWAGG
FPLL