| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1973 |
|---|
| Symbol | |
|---|
| ID | 7399925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 1970495 |
|---|
| End bp | 1971532 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643709044 |
|---|
| Product | Succinylglutamate desuccinylase/aspartoacylase |
|---|
| Protein accession | YP_002566621 |
|---|
| Protein GI | 222480384 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3608] Predicted deacylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0907521 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG AACGGGTGTT CACGTACAAC GGCGGCGCGG TACCGCCGGG CGAGACGCAG
AACATCCGCT ACGGCATCAG CGAGACGTAC CTCGGCGACC CGGTTCGGAT CCCCGTGACG
ATCGTCAACG GCGAGCGCGA CGGGCCGACA GCGTTCCTCA TGGCGGCCGC CCACGGCGAC
GAGCTCAACG GTATCGAGGT CGTCCGCGAG GTCGCCCACG AGTGGGACCT CTCGAAGCTC
GCTGGCACCC TCGTCTGTCT CCCAGTGCTC AACGTTCCGG GGTTCCTCGC CCAACAGCGC
TACCTCCCCG TCTACGACCG CGACCTGAAT CGGTCGTTCC CCGGGAAGGC CGGCTCGACC
AGCTCGAAGC GGATGGCGAA TCAGATCTAC TCGAACTTCA TCGCGCCCTG TGATTTCGGG
CTCGACTTCC ACACTTCCAC CCGCGGTCGA ACGAACATGC TCCACGTCCG CGGCGACATG
ACCGACGACG GCGTTCACCG CCTCGCGTTG GCCTTCGGCT CGAAGGTGGT CATCGACAGC
GACGGACCGA GCGGCACCCT CCGCGGCGAG GCGACCGCCG ACGGGATTCC CACGATCACG
ATCGAGATGG GCGAGGCGCA CCGGTTCCAG CGCCCGCTTA TCGACGACGC GCTCGCGGGG
GTACGCTCCG TCTTCGCCGA GTACAGCCTC TTAGATACCG ATACGGTGCG TTGGCCCGGC
TGGCGGACGA TCGTCGCCGG TACGGGCGAG AAGACGTGGC TCCGGGCAGA CTCCGGCGGG
ATCGTCGACA CCCACTTCGA GAGCGGCTCA CTCGTTCACG AGGGCCAGCG GATCGCGACG
ATCACCAACC CGTTCAAGAA AGACGAGGTC GTGGTCGAAG CACCCTTCAC CGGCCTGCTG
ATCGGCCTCC TAGAGAACCC GGTCGTTTAC CCCGGGAATC CGCTGTGTCA CCTCGTCGAG
ATCGATGAAT CGACTCGGCG AGCGATCGAA GCCGGTGACG CCCCGGAGCC CGTCGGACAG
CCGAACGCAG CGGAGTGA
|
|---|
| Protein sequence | MSDERVFTYN GGAVPPGETQ NIRYGISETY LGDPVRIPVT IVNGERDGPT AFLMAAAHGD
ELNGIEVVRE VAHEWDLSKL AGTLVCLPVL NVPGFLAQQR YLPVYDRDLN RSFPGKAGST
SSKRMANQIY SNFIAPCDFG LDFHTSTRGR TNMLHVRGDM TDDGVHRLAL AFGSKVVIDS
DGPSGTLRGE ATADGIPTIT IEMGEAHRFQ RPLIDDALAG VRSVFAEYSL LDTDTVRWPG
WRTIVAGTGE KTWLRADSGG IVDTHFESGS LVHEGQRIAT ITNPFKKDEV VVEAPFTGLL
IGLLENPVVY PGNPLCHLVE IDESTRRAIE AGDAPEPVGQ PNAAE
|
|---|
| |