Gene Hlac_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1957 
Symbol 
ID7399909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1957091 
End bp1957696 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content62% 
IMG OID643709028 
ProductOsmC family protein 
Protein accessionYP_002566605 
Protein GI222480368 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.226046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCG AACGACAACT ATCGCACGGT ATCGACCTCG AAACACTCGA CGGGTTCGCC 
GCACACGCCG CAGAGAATCC CCAAGCCGTC CGGCTTGGCC TCGGGGCGTC TGCGACCTAC
GAGGGGACAG CCGCGCACAG CCTGGCGAAA GTCGATAGCT ACGAGCTTGG GGATGAGACG
ATCGCCCGCG AAACGCGTGA ATACACGATT CCCTACGGCG CCTGGAAGGA AGTACTGGAT
GCGGGTGGGT GGGTCGGTGG GATCGACCGG CTCGAACCGG TAGAAGCCGC GCTGTCGGCA
CTGGCTGCCT GTATCAACGT CGGAATCAGC ATCAACGCCG CCGCCAACGG CGTGGATATC
GACCATCTCC AGACGCGTGT CCGGACCGAT TTCGATCCAG CGGTTCTCTT CGGTCTCGAG
GAACTCAAGG AGGCCGACTC GGTCTTCGAG AACCTCACCG CCGAGATCGA GATAGACGGC
GACAATCTCG ATCAGGATCT GATCGACGAA TGGGCACGGC GAGCACCCGT CTACACGTTC
GTCTCCCTCG CTCAGGACGT CGATATGAGC GTCAACACGC CTGCGGAGAT GGTGAGCGAC
GACTGA
 
Protein sequence
MTAERQLSHG IDLETLDGFA AHAAENPQAV RLGLGASATY EGTAAHSLAK VDSYELGDET 
IARETREYTI PYGAWKEVLD AGGWVGGIDR LEPVEAALSA LAACINVGIS INAAANGVDI
DHLQTRVRTD FDPAVLFGLE ELKEADSVFE NLTAEIEIDG DNLDQDLIDE WARRAPVYTF
VSLAQDVDMS VNTPAEMVSD D