Gene Hlac_1949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1949 
Symbol 
ID7399901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1949355 
End bp1949951 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content66% 
IMG OID643709020 
Producthypothetical protein 
Protein accessionYP_002566597 
Protein GI222480360 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.820195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.819034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCC GGCAGAACAT CCGTCACTGG GCGGCCAAAA AGGCGTTGAC GACGCCGGTC 
GTCGGCGACG TGGCGAACGA CAAGCTCGTC GACCTCCACA CGAGCATCTT CCTCAACAAG
GCCGACGAGG ACCGGCGCGA GGAGCGACGC GCCCACCTCG ACAGCTTCTT CGACGCGACG
ATGGATACCT ACGTCGCTGC CCTAGAGGCC GGTTTCCCGG AGGCGGAGGC CCGCGAGATC
ACCCACGTGC AGGCCAACTT CGACTTCTTC AACCACGGGT GGACGGAGAT GATGGAGATC
CCGGGCGACG AGCTGGAGCC GCACTACCGC CGGTACGAGT CCTTCTTCGG CGACCACGGG
ATCACGATCG ACGACCCGCT CGGCGAGTTC CGGCCCGCGG AGGGCATCGT CGAGGCCACC
GAGACCCCCG AGAAACTTGA GACGCCGGAG TACGAGAACG CGCTGGCCGG CTTCGCCGAC
GACGTGTACG TCGAGACCGA CGACGGGGAG ACAGTCGTCG GCGGCGAGAC TGAGGAGCCA
GAAGAGGTCG ACCCGTCCGC TGCGCCCGGA CTCGACGAGG ACGAGGCGAG CGCCTAA
 
Protein sequence
MKIRQNIRHW AAKKALTTPV VGDVANDKLV DLHTSIFLNK ADEDRREERR AHLDSFFDAT 
MDTYVAALEA GFPEAEAREI THVQANFDFF NHGWTEMMEI PGDELEPHYR RYESFFGDHG
ITIDDPLGEF RPAEGIVEAT ETPEKLETPE YENALAGFAD DVYVETDDGE TVVGGETEEP
EEVDPSAAPG LDEDEASA