| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1946 |
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| Symbol | |
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| ID | 7399898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1944997 |
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| End bp | 1947201 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643709017 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002566594 |
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| Protein GI | 222480357 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0751397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.355386 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCGCG GAAACGACGA CGAGCCCTCG CCGCCGGACG GCGGGTTCTT CTCGTCTGTC
GTCGAGGAGA GCAGGGATCC GATCGTCTCG ATCGACGATG CCGGCGCGAT CGTCTACGCC
AACCCCGCCG CCGAGGACGC CCTCGGCCGC GACGCAGCGT CTCTCGCGGA CCGTCGGCTC
GCGGAGCTGA TCCCGGATGC GACCACCAAC CGACGAGCGG CCTCGCTCCG CGATCGGCTC
GTCGAGCCGG CGCGGCTCGA CGACGCGGGC GACGTTTCGG TGCCGCTGGC GGCGGCCGAC
GGGGAGACGC GCACTTTCTC GGTGCGGTTC CATGCACACG ATGTCGACGG CAAACCCGTG
TACACCGGCG TGTTCCGCGA GCGAAGCAGC GGTGACCGTG ACCGCGAGTT CCGGACGTTT
CGGAATCTCG TCGAACACGC GGGACACGCG ATCTACGTCA CCGACACCGA CGGGACGATC
GAGTACGTCA ACCCGGCGTT TACTCGCCAC ACCGGCTACG AGCCCGAGCA GGTGATCGGG
GAGACGCCGG CGGTGCTCAA CTCCGGTGAG ATGTCCGACG AGTACTTCGT GTCACTGTGG
GAGACGCTCT GCGCCGGCGA GGTGTGGGAA GAGGAGATCG TCGACCGCCG GAAAGACGGG
ACTCACTACC ACGCTCACCA GACGATCGCG CCCGTATTCG ACGACGCCGG GACGGTGTCC
CGGTTCGTCG CCATCCAGAC CGACGTGACG GAGCGGAAGG CGGCCGAGGG GAAGCTGAAA
CAGTACCGCG ACATCGTCGA GCGGCTCGAC GACCCCATCA TGTTGCAGAA CCGCGACGGC
GAGTTCGAAC TGCTCAACGA GGCGGTGAGC GAGTTCGCCG GTACCTCCCG CGAGGAACTG
TACGACGACG ACGAGACCGC GTTCATGGAC ACCGAAACGG CCGCGGAGAT CGACGAGCGA
CGACAGGAGG TGCTCCGGAC GGAGGAGCCG GTCGAGTACG AGGTGTCGCC GTCGTTCGAG
CGGAGCGGTC GCGACGCGAC GTTCAGCACC CGGCGGTACC CGTACTACGA CGGCGCCGAG
GCGCTCGCGG GGACGTTTGC GATCTGTCGG GACGTCACCG AGATCAAGGA ACGGGAGGCC
GACCTGGAGC TATACGAGCG CGCAGTCGAC GGCGCGACGG ATCTGATCGC CGCGGTCGAC
CGCGACGAGC GGTTTCTGTT CGCGAACGAG CAGTACCGGA CGTACCACGG GATCGGCGAC
GCGGACATCA CCGGGCTCAC ACTGGCCGAT GCCGTCGGTG ACGACAGCTA TCCGGACGTG
CGGCGGCAGA TGACTCGAGC ACTCGCAGGG CAGTCAGTGG AGTACCGCGC GATGCGGAGG
CATCCCGTCC GCGGGACACG AATGTTCGAC GTGCTGTACT ACCCGCTGGA AGGGCCGGAT
AAGGAAGACA ACCGCGTCGT CGGCGTCGTC GGAGTCCTCC GCGACGTGAC GGACAGCGAG
AATCGCGCGC ACCAGCTTCG GGTCGTAGAC CGCGTCCTCC AGCACAACCT CCGGAACGCG
ATGACCGTCG TCCGCGGCCG GGCGCAGCAG ATAGCCGACA CAGCGGGAGA GCGTGAGGCA
GCCGCGGACG AGGGTGCGGC AGCCGGAGAC GTCGACTCGG TCGCAGCGGG CGCCGCCGAC
ATCGCCGCGC GGGCCGAGGC ACTGCTGTCG ACGAGCGAGA AGGTCCACCA GATCACCGAG
GTGTTGAGCG ATCCACCGGA GACCGAGCCG GTCGACGTCG CACGAGCGGT CGAGGCGGTC
GCGGCCGAGA TCGCCGACGC GTTCCCCGAG GCATCGGTGA CCGTGTCGAC TCCGGACGGG
ACAGTCCACG CGTCGGCGAC AACATGGATC GACTGGGCGA TAGACGAACT GGTCCGGAAC
GCGATCGTCC ACCACGACCG CGAGTCGCCG ACCGTCGAGA TCACGGTCAC CGCGGCTGAG
GATACGGTCA CGGTCACCAT CACGGACGAC GGACCGGGGC TAACCGGGAT GAACCGAGAC
GTGTTAGAGA CCGGCGAGGC CGTCGACGCC CTGTACCACG GCAGCGGGCT CGGCCTCTGG
CTCGTCTACT GGGTGGTCCA GCAGTCGGGC GGCGACGCGG CGGTCCGCGA CGCGACGCCC
CGCGGGACGG TCGTGACGGT CACGCTCCCC CGATCGGATC GGTGA
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| Protein sequence | MSRGNDDEPS PPDGGFFSSV VEESRDPIVS IDDAGAIVYA NPAAEDALGR DAASLADRRL
AELIPDATTN RRAASLRDRL VEPARLDDAG DVSVPLAAAD GETRTFSVRF HAHDVDGKPV
YTGVFRERSS GDRDREFRTF RNLVEHAGHA IYVTDTDGTI EYVNPAFTRH TGYEPEQVIG
ETPAVLNSGE MSDEYFVSLW ETLCAGEVWE EEIVDRRKDG THYHAHQTIA PVFDDAGTVS
RFVAIQTDVT ERKAAEGKLK QYRDIVERLD DPIMLQNRDG EFELLNEAVS EFAGTSREEL
YDDDETAFMD TETAAEIDER RQEVLRTEEP VEYEVSPSFE RSGRDATFST RRYPYYDGAE
ALAGTFAICR DVTEIKEREA DLELYERAVD GATDLIAAVD RDERFLFANE QYRTYHGIGD
ADITGLTLAD AVGDDSYPDV RRQMTRALAG QSVEYRAMRR HPVRGTRMFD VLYYPLEGPD
KEDNRVVGVV GVLRDVTDSE NRAHQLRVVD RVLQHNLRNA MTVVRGRAQQ IADTAGEREA
AADEGAAAGD VDSVAAGAAD IAARAEALLS TSEKVHQITE VLSDPPETEP VDVARAVEAV
AAEIADAFPE ASVTVSTPDG TVHASATTWI DWAIDELVRN AIVHHDRESP TVEITVTAAE
DTVTVTITDD GPGLTGMNRD VLETGEAVDA LYHGSGLGLW LVYWVVQQSG GDAAVRDATP
RGTVVTVTLP RSDR
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