| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1937 |
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| Symbol | |
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| ID | 7399889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1937122 |
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| End bp | 1938405 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643709008 |
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| Product | putative pseudouridylate synthase |
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| Protein accession | YP_002566585 |
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| Protein GI | 222480348 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1258] Predicted pseudouridylate synthase |
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| TIGRFAM ID | [TIGR01213] conserved hypothetical protein TIGR01213 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTAC TCGAGGTCGC GGCGCGGGCG ACCGGGACGG GGCCGGTGTG CGACGCGTGT
CTCGGCCGGC TCGTCGCCGA CCGGAGCTTC GGGCTGTCGA ACGCCGAGCG CGGGTCGGCG
CTGCGGACCA GTCTTGCGCT CCGCGACGAC GAGGACTACG AGCCGGTCGA GACGGCAGAC
TGCTGGGTGT GTGAGGGGCG CTGCACCGAG TTCGACGAAT GGGCCGAGCG GGCCGCCGAG
GCGGTTGAGG ACGTGGAGTT CGCCACCTAC AACGTCGGCA CCCGTCCCCC GCCGCTGATC
GAGGAGAACG AGGCGCTGCT CCGCGAGGAA GCCGGGCTCG ACGACGACGC GGGCGAGCCG
TTCAAGTCGG AGTTCAACCG CGAAGTCGGG AAGCGGTTCG GCCGGCTCAC GGAGACGGAG
GTGTCGTTCG ACCGCCCGGA CGTGCAGTTC ACGATCGACC TCGCCGAAGA CGAGATCGAC
GCGAAGGTGA ACTCCACGTT TGTGTACGGC CGGTATCGAA AACTGGAACG GGACATCCCG
CAGACCGAGT GGCCCTGCCG CGAGTGCAAG GGCTCGGGGC GACAGGGCGC GGACCCCTGT
GATCACTGTG GCGGCTCCGG CTACCTCTAC GACGACAGCG TCGAGGAGTA CACCGCGCCC
GTCGTCGAGG ACGTGATGGA CGGCACCGAG GCGACGTTCC ACGGCGCGGG CCGGGAGGAC
GTGGACGCCT TGATGCTCGG AACCGGGCGC CCGTTCGTGA TCGAAGTCGA GGAGCCGCGC
CGCCGCCGGG TCGACACCGA TCGCCTGCAG GCCGACATCA ACGCCTTCGC CGACGGCGCC
GTGGAGGTCG AGGGGCTCCG GCTCGCGACC TACGACATGG TCGAACGCGT GAAGGAACAC
GACGCTGCGA AGCGCTACCG CGCCGAGGTA GCCTTCGACG CCGACGTGGA CGCCGACGCC
CTCGCGGCCG CGGTCGAAGA GCTTGAGGGG ACGACTGTCG AGCAGTACAC CCCGAACCGG
GTCGACCACC GCCGGGCGAG CATCACCCGC GAGCGCGACG TGTACGAGGC GACCGCCGAA
CTCGACGACG CCCGCCACGC GATCGTGGAG ATTCACGGCG AAGGTGGGCT CTACATCAAA
GAGCTGATCT CCGGCGACGA GGGCCGGACG GAGCCGAGCC TCGCAGGCCT GCTCGGCGTC
GGCGCCGAGG TCACCGCGCT CGACGTGGTC GCCGTCGAGG GCGAAGACGA GCCGTTCGAG
CGCGAGGAGT TCTTCCGGGA GTGA
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| Protein sequence | MDVLEVAARA TGTGPVCDAC LGRLVADRSF GLSNAERGSA LRTSLALRDD EDYEPVETAD
CWVCEGRCTE FDEWAERAAE AVEDVEFATY NVGTRPPPLI EENEALLREE AGLDDDAGEP
FKSEFNREVG KRFGRLTETE VSFDRPDVQF TIDLAEDEID AKVNSTFVYG RYRKLERDIP
QTEWPCRECK GSGRQGADPC DHCGGSGYLY DDSVEEYTAP VVEDVMDGTE ATFHGAGRED
VDALMLGTGR PFVIEVEEPR RRRVDTDRLQ ADINAFADGA VEVEGLRLAT YDMVERVKEH
DAAKRYRAEV AFDADVDADA LAAAVEELEG TTVEQYTPNR VDHRRASITR ERDVYEATAE
LDDARHAIVE IHGEGGLYIK ELISGDEGRT EPSLAGLLGV GAEVTALDVV AVEGEDEPFE
REEFFRE
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