Gene Hlac_1932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1932 
Symbol 
ID7399884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1933830 
End bp1934312 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content63% 
IMG OID643709003 
Productprotein of unknown function DUF456 
Protein accessionYP_002566580 
Protein GI222480343 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0633632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTTCT CCGCGGCTGA AATAGCGATC GTGCTGCTCG TCGTGTGGAC CGCCAGTTCG 
TTCGTCCCGT TCGTGCCAAG CGGCGTCCTC GCAGCACTGA CCGTTATCGG CTACACGTAC
ACCACCGGCT TCACCGAGCC GAGCCTCACC GTCCTGCTCG CACTCGTTCT CGTCTCGCTT
CTGGCCTCCG CGGTGGAACT GTTGTCAGGA ATGCTCTCCG GAAAGCTCGG TGGCGCATCG
ACGCGGACCG TCGCCGTCGG CACGCTGGTT GGCATCGTGT TGCTGTTCGT GATGGGCCCG
ATCGGTCTCG TCGTCGGAGT GGGTGGAACC GTGTTTCTCG GTAGCCTCTA TGAGAACGGC
GCCGAGCCGC GTGTCGCCGT CCGACAGTCA GTCTACGCGG TGATCGGTGT CTTCGCCGGC
CCGTTCGTAC AGGCAGTCAT ATTGGCTGGT GTCGCCGTCG CGTTTGCGAT CTCCGTCTTG
TGA
 
Protein sequence
MVFSAAEIAI VLLVVWTASS FVPFVPSGVL AALTVIGYTY TTGFTEPSLT VLLALVLVSL 
LASAVELLSG MLSGKLGGAS TRTVAVGTLV GIVLLFVMGP IGLVVGVGGT VFLGSLYENG
AEPRVAVRQS VYAVIGVFAG PFVQAVILAG VAVAFAISVL