Gene Hlac_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1906 
Symbol 
ID7399858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1910483 
End bp1911037 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content71% 
IMG OID643708977 
Productphosphodiesterase, MJ0936 family 
Protein accessionYP_002566554 
Protein GI222480317 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG GTATCGTCTC CGACACCCAC GACGACCTCG CCGCCGTCGA GGCGGCCGTC 
ACGCTGTTCG AACGCGAGGG CGTCGACGCC GTCGTCCACT GCGGCGACTT CGTCGCGCCC
TTCTCCGTGA CCCCGTTCGA CGTCGGGGGC GATTCCGACG CCGGCTTCGA CTTCTACGCC
GCCCGCGGCA ACAACGACGG AGAGTGGGCG GTCCAGTCGA CCGTCGAGTC GTTCGGCACG
TACCTCGGCG AGGCGGGGAC GCTCTCGTTC GGGGACGAGG AGAACGCCGT CGACATCGCC
GTCACCCACG GCACGAGCGC GGTCGTCGTC GACGCCCTCG TCGACTGCGG CGACTACGAC
TACGTGTTCC ACGGTCACAC CCACGCGCAC GACGCCGAGG AGCGCGACGG GACGGTGCGG
GTGAATCCCG GCGGACTCCC CATCCCCGTC GACGGCGCGG ACGACGCCTT CCGCGTCGCG
GTCCTCGACA TTGGAGCGGA CGCCGGCGGG GCGAGCGGGG CCAACGCGGT GATGCACCAC
GTCCTCGACG CCTGA
 
Protein sequence
MRIGIVSDTH DDLAAVEAAV TLFEREGVDA VVHCGDFVAP FSVTPFDVGG DSDAGFDFYA 
ARGNNDGEWA VQSTVESFGT YLGEAGTLSF GDEENAVDIA VTHGTSAVVV DALVDCGDYD
YVFHGHTHAH DAEERDGTVR VNPGGLPIPV DGADDAFRVA VLDIGADAGG ASGANAVMHH
VLDA