Gene Hlac_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1900 
Symbol 
ID7399852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1901513 
End bp1902070 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content68% 
IMG OID643708971 
Producthypothetical protein 
Protein accessionYP_002566548 
Protein GI222480311 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.141595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGC TCGCGATCGA GTACGGCACC CATGATCGGG TCCGGGAGAT CGTCGATCGG 
CTGACCTACT GCGCCGAACA CGTCAGCGTC GCGTTCGACG GCTGGGACGA GCCGCACGTC
AAGGGGCCGG GGCTCTACTT CGCGGTCGTC GCCGACCGCG GCTACGGCGC GTACGCCGAC
CCAATGGGCG ACAACCGGTG GCCCCGAAAG AGCTGTACCA CGGTGTTCGA CGAGGACGCG
TTCGTCGACG CCGTCGAGAC GGTGAGCGTC AAGCGGGACG GCGGGATCGT CGTCGCGGTC
GACGGCGAGA TAGAGGCACA GATGGTGCGG TTCCGCGACC TTGGCACCCG GAGCGGCGAG
TCCACCCTCG TCGACGACGT GAGCTACGAG CCGTGGATGG GGTCGCGGCA TATGAGCGCG
ATCGAGACCT CAGTCCGGCC GGAGGTCGTA GCGACCGTGA CGCTGAGCGA GGAGACCGGC
CGGGTGAGCG TGTTCCGCAA CGGCGACGCG GAGTCGATGG AGCGCAACGA GCTCGGCGGG
GTGTGGCGCG TAGAGTAG
 
Protein sequence
MSGLAIEYGT HDRVREIVDR LTYCAEHVSV AFDGWDEPHV KGPGLYFAVV ADRGYGAYAD 
PMGDNRWPRK SCTTVFDEDA FVDAVETVSV KRDGGIVVAV DGEIEAQMVR FRDLGTRSGE
STLVDDVSYE PWMGSRHMSA IETSVRPEVV ATVTLSEETG RVSVFRNGDA ESMERNELGG
VWRVE