Gene Hlac_1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1898 
SymbolubiA 
ID7400092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1899645 
End bp1900544 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content70% 
IMG OID643708969 
Productprenyltransferase 
Protein accessionYP_002566546 
Protein GI222480309 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.622194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGAG CCGTGAGCGA CACCGTAACC GGCCCCGATC AACGCTCGAT CCCCGACCTC 
CTCCAGTACC TGCTAGTGCT GTCGCGGCCG CGGTTCTGGC TGTATCTCGC CGGTCCCGTC
GCCGTCGGCG TCACCTACGG AATTGCCGAC GTGAGCGAGC TGTTCACGCC GGTCACTGTC
GGGCTTGCGG CGTACTTCCT CGTGCCGGCG AACGTCTTCC TCTACGGCGT CAACGACGCC
TTCGACGCCG ATATCGACGA GCTGAACCCG AAGAAAGAGG GTCGCGAGGC GCGCTGGCGG
GGCGACCGAC TCGTCGCACT CGCGGTGGTC GTCTCCGGCG CGCTCGGGGT CGCCGTATTC
GCGATCACAC CGCGAGTCGC ATGGCCGTAC CTCGCCGGCT TCCTGCTTCT CGGTGCCGGC
TACAGCGCCC CGCCAGTGCG GTTCAAGACG ACGCCGTTCC TCGACTCCGT CTCGAACGGA
TTGTACATCT TACCGGGTGC GGCCGCGTAC GCTGCCGTGT CCGGGACGCA CCCACCGATC
GCGGCGCTCG CGGGCGCATG GCTCTGGGCG ATGGGGATGC ACACCTTCTC TGCGATCCCC
GACATCGAGC CGGACCGCGC CGCCGGGATC CGGACGACGG CGACGCTTCT GGGTGAGGGG
CGGACCTACG CGTACTGCGT CGCCTGTTGG GTCGCCGCCG CGGTCGCGTT CGCCGCGGTC
GACATCCGGC TCGGCGTGCT GCTCGGCGTG TACCCCGTCT TCGCGGCGTG GGTCGCCCGG
TCGTCGATCG CAGTCGACCG CGCGTACTGG TGGTTCCCGG CGCTGAACAC CGCCGTCGGC
ACCCTGCTGG CGATGGGGGG ACTCTGGCGC GTCTACCCCG TCACGGAGGC CCTCGCGTGA
 
Protein sequence
MIGAVSDTVT GPDQRSIPDL LQYLLVLSRP RFWLYLAGPV AVGVTYGIAD VSELFTPVTV 
GLAAYFLVPA NVFLYGVNDA FDADIDELNP KKEGREARWR GDRLVALAVV VSGALGVAVF
AITPRVAWPY LAGFLLLGAG YSAPPVRFKT TPFLDSVSNG LYILPGAAAY AAVSGTHPPI
AALAGAWLWA MGMHTFSAIP DIEPDRAAGI RTTATLLGEG RTYAYCVACW VAAAVAFAAV
DIRLGVLLGV YPVFAAWVAR SSIAVDRAYW WFPALNTAVG TLLAMGGLWR VYPVTEALA