Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1891 |
Symbol | |
ID | 7400085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1892030 |
End bp | 1892926 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643708962 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_002566539 |
Protein GI | 222480302 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0168492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.486121 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGTGT TGGTAGCCGG CGGAACCGGG TTCATCGGGT CGTACCTCTG CCGCGCGCTC GCAGACGGGG GTCACGAGGT GACTGCCCTC TCCAGGTCGC CGAGCGATAC CCCCGAGGGG GTCGCGTCCG CGACGGGCGA CGTTACCGAC TACGACTCGA TCGCCAGCGC GGTCGAGGGG CAAGACGCGG TGGTGAACCT GGTCGCGCTC TCGCCGCTGT TCGAGCCGAA GGGCGGGAAC GTCATGCACG ACCGGATCCA CCGCAAAGGC ACAGAGAACC TCGTTCGGGC CGCCGAGGAG GGCGGCGCCG AGCGGTTCCT CCAGTTAAGC GCGCTCGGCG CCGACCCCGA CGGCGACACC GCCTACATCC GCGCGAAGGG ACAAGCCGAG GAGATCGTCC GCGAGAGCGG CCTCGGCTGG ACGATCTTCC GCCCCTCCGT CGTCTTCGGC GAGGGCGGCG AGTTCGTCTC CTTTACCAAG CGGCTGAAGG GGATGTTCGC GCCGGGTCTG CCTCTGTACC CGCTTCCCGG CGGCGGGAAG ACCCGCTTCC AGCCGATCCA CGTCGAGGAC CTCGTCTCGA TGCTGGTCGC GGCGCTGGAA GAGGACGAGC ACGTCGGCGA GACCTACGAG ATCGGCGGTC CAGAGACGTT GACGCTCAGG CAGGTGACCG ACCTCGTGTA CGAGGCCGAA AAGAAGGGAG TCACGATCAT TCCCCTGCCG ATGCCGCTCG CCCGGATCGG GCTCACAGTC CTTGGCGCCG TCCCGGGGTT CCCGATGGGC GCTGACCAGT ACCGGTCGTT GAAGTTCGAC AACACGACCG CACACAACGA CGTCGAGGCG TTCGGCGTCG ACCCTGCCGA GCTGACCACG CTCGGAGAAC ACCTCGGGGT GGTGTGA
|
Protein sequence | MKVLVAGGTG FIGSYLCRAL ADGGHEVTAL SRSPSDTPEG VASATGDVTD YDSIASAVEG QDAVVNLVAL SPLFEPKGGN VMHDRIHRKG TENLVRAAEE GGAERFLQLS ALGADPDGDT AYIRAKGQAE EIVRESGLGW TIFRPSVVFG EGGEFVSFTK RLKGMFAPGL PLYPLPGGGK TRFQPIHVED LVSMLVAALE EDEHVGETYE IGGPETLTLR QVTDLVYEAE KKGVTIIPLP MPLARIGLTV LGAVPGFPMG ADQYRSLKFD NTTAHNDVEA FGVDPAELTT LGEHLGVV
|
| |