Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1890 |
Symbol | |
ID | 7400084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1891029 |
End bp | 1891922 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643708961 |
Product | UspA domain protein |
Protein accession | YP_002566538 |
Protein GI | 222480301 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.108778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.382663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCGATC GCATCCTGTT CCCGACCGAC GGCAGCGACG GGGCGAGCGC CGCGTTCGAT CACGTCCTCG ATATCGCGGC CGATCACGGC GCGACCGTCC ACGTTCTCAA CGTCGCCGAC ACGACCCACG ACAGCGTCAC ACGGATCGAC GGCGAGATTG TCGACGTACT CGAACGCGAG GGCGAGGAGA TCGTCGAGGC GGTCGCGGAC CGCGCTGCCG ACCGGGGAAT CGAGACGGTG ACCAAGGTGC TTCAGGGCGG CGTCGCCGAG ACAATCGCCA CGTACGCCGG GGAGCACGAG ATGGACCTCG TCGCCATGCC GACTCGCGGT CGAACGGGAT TCGACCGCCT GCTCCTCGGG AGCACCACCG AGCGCGTCGT CCGAGAATCG ACGGTGCCGG TGCTCAGTAT CCGACCGGAC GGAGAGACGG CGCGGTACCC CTACCGGAAC GTTCTCGTGC CCACCGACGG GAGCGAGCGC GCCGCCGACG CCCTCGACCG GGCGCTGACG CTCGCCAAGC GCGCGGACGC GACGGTCCAC GTCCTCACCG TCGTCGACGT CGCGACCGTC GGGGGCGAGG GGTACTCGGG CGTGGACGCG CTGGTGGAGG GTGCCGAGGA GACGGTCATG GAAGCGGCGG CGACCGCCGA GGAAGCGGGT GTCGATTCGG TCGAGGCAGT CGAGGTCGGG TCGTCTGCAA CGCGCGGGAT CCAGTCGTAC ATCGACGAGA ACGACATTGA TCTGGTCGTC ATGGGGACGC AGGGACGAAC CGGAGTCAAG CGGTACCTCC TCGGGAGCGT CGCCGAGCGC ACCGTCCGCA CGTCTCCGGT ACCGGTGTTG ACGGTTTCCG ACCCGGGCGA CGAGGCGGGT GACGAAACGG GCGACGAAGA CTGA
|
Protein sequence | MFDRILFPTD GSDGASAAFD HVLDIAADHG ATVHVLNVAD TTHDSVTRID GEIVDVLERE GEEIVEAVAD RAADRGIETV TKVLQGGVAE TIATYAGEHE MDLVAMPTRG RTGFDRLLLG STTERVVRES TVPVLSIRPD GETARYPYRN VLVPTDGSER AADALDRALT LAKRADATVH VLTVVDVATV GGEGYSGVDA LVEGAEETVM EAAATAEEAG VDSVEAVEVG SSATRGIQSY IDENDIDLVV MGTQGRTGVK RYLLGSVAER TVRTSPVPVL TVSDPGDEAG DETGDED
|
| |