Gene Hlac_1866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1866 
Symbol 
ID7400059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1871779 
End bp1872696 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content67% 
IMG OID643708936 
ProductAcetamidase/Formamidase 
Protein accessionYP_002566514 
Protein GI222480277 
COG category[C] Energy production and conversion 
COG ID[COG2421] Predicted acetamidase/formamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0100916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGAG CACTGACATC CTCTCGCGAC GGTCACGTCT ACGAGTTCGC GCCGACGATG 
GAGCCCGTCT ACGAGGCGGC CGACGGCGAG TCGCTCACGA TCGAGACGAT CGACAGCCTG
AATGGAGCGA TCCAGACCGA CGACGACCGC CTCGACGCCA TCCCCGAGGA GGTGAACGCC
GCGACCGGGC CGATCGCGGT CGAGGGGGCG AGCCCGGGCG ACGTGCTCGC GGTCGAGATC
GAGGACGTGC GCGTCACCGA AGACCGAGGG CGCGTTCTCA CCGCCCCCGG GTTCGGCCTT
CTGCAGGACG ATCCCGAGAT CGAACACCCG GCGACGCGGA TCACCGAAGT GGACGCCGAG
GGAGCGAGTG AGCAGATCGA CTTCGAGGGG ATCGACGTGC CGATCGAGCC CGTGATCGGG
ACGATCGGGG TCGCCACCGC GGAGGGATCG GTCTCGACGC TCACCCCGGA CGACCACGGC
GGCAACCTCG ACACGACCGA CATGACGACT GGGACGACCG CGTACTTCCC GGTGTTCCAG
GAGGGCGCGA TGCTCGCGAT GGGCGACTCG AAGGCCGCGA TGGCCGACGG CGAGATGTGC
GGCACGGGCG CCGAGATCGG CACCGAGATC GACGTGACCC TCTCGGTGAT CGAGGATCCG
GAGATCTCGC TCGATCGCCC TCTTGTCGAC ACCGGCGACG CAGTCAAAAC GATCGCGAGC
GCCGAGACGA TGGAGGAAGC CGTCGAACTC GCGAATCGCG ATGTCGTCCG GCTACTGGCA
CACGAACACG GCTTCTCCCG GACGGAGGCG TACCTGTTCT CCAGTCTCGT CGGCGGCCTC
GAAATAAGTC AAGTGGTCGA CCCGCAGGTG ACCGCGCGGA ACGCGGTGCC GAGCGAGTAT
CTGTCGGTTC CGTACTGA
 
Protein sequence
MSRALTSSRD GHVYEFAPTM EPVYEAADGE SLTIETIDSL NGAIQTDDDR LDAIPEEVNA 
ATGPIAVEGA SPGDVLAVEI EDVRVTEDRG RVLTAPGFGL LQDDPEIEHP ATRITEVDAE
GASEQIDFEG IDVPIEPVIG TIGVATAEGS VSTLTPDDHG GNLDTTDMTT GTTAYFPVFQ
EGAMLAMGDS KAAMADGEMC GTGAEIGTEI DVTLSVIEDP EISLDRPLVD TGDAVKTIAS
AETMEEAVEL ANRDVVRLLA HEHGFSRTEA YLFSSLVGGL EISQVVDPQV TARNAVPSEY
LSVPY