| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1843 |
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| Symbol | rps28e |
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| ID | 7400035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1850440 |
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| End bp | 1850664 |
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| Gene Length | 225 bp |
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| Protein Length | 74 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643708912 |
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| Product | 30S ribosomal protein S28e |
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| Protein accession | YP_002566491 |
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| Protein GI | 222480254 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2053] Ribosomal protein S28E/S33 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00486398 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.189699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGCAG AAGAGGGCAC CGGCGACTCG ACGACCGCGG AGGTCATCGA GGTCGTCGGC
AAGACCGGGA TGCACGGCGA GGCCATGCAG GTCAAGTGCC GCATCCAGGA AGGATCGAAC
CAGGGCCGGA TCATCACCCG GAACGTCCTG GGCCCCGTCC GCATGGGCGA CGTGCTCCAG
CTCCGGGAGA CCCAGCGCGA TGCCGACTCC ATCGGAGGGC GATAA
|
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| Protein sequence | MSAEEGTGDS TTAEVIEVVG KTGMHGEAMQ VKCRIQEGSN QGRIITRNVL GPVRMGDVLQ
LRETQRDADS IGGR
|
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