| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1842 |
|---|
| Symbol | rpl7ae |
|---|
| ID | 7400034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 1850071 |
|---|
| End bp | 1850433 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643708911 |
|---|
| Product | 50S ribosomal protein L7Ae |
|---|
| Protein accession | YP_002566490 |
|---|
| Protein GI | 222480253 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1358] Ribosomal protein HS6-type (S12/L30/L7a) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00104534 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.186642 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGTTT ACGTAGACTA CGAAACCCCA GCCGACCTCG CCGAGCGATC GCTTGAGGCG
CTCGAGGTCG CCCGAGACAC CGGTACCGTG AAGAAAGGAA CCAACGAGAC CACGAAGGCC
GTCGAGCGCG GCAACGCCGA CCTCGTCATC GTCGCCGAGG ACGTCTCTCC CGAAGAGATC
GTGATGCACC TCCCCGAGCT TGCCGAGGAG AAGGGCATCC CGGTCGTCTT CGTCGACACG
CAGGATGAAG TCGGCCACGC CGCCGGCCTC GAAGTCGGCT CGGCCGCCGC CGCCGTCATC
GACGCCGGTG ACGCCGACGA CGACGTCGAG GATATCGGCG AGAAGGTCGC GGAGCTCCGA
TAA
|
|---|
| Protein sequence | MPVYVDYETP ADLAERSLEA LEVARDTGTV KKGTNETTKA VERGNADLVI VAEDVSPEEI
VMHLPELAEE KGIPVVFVDT QDEVGHAAGL EVGSAAAAVI DAGDADDDVE DIGEKVAELR
|
|---|
| |