Gene Hlac_1834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1834 
Symbol 
ID7400026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1843371 
End bp1844492 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content68% 
IMG OID643708904 
Productcobalamin synthesis protein P47K 
Protein accessionYP_002566483 
Protein GI222480246 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.311808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.553805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACG ACCGGATTCC CGTGACCGTT CTCAGCGGGT ACCTCGGCGC CGGGAAGACG 
ACGATGGTGA ACCACCTGCT CGCGAACCCC GGCGACAGGC GGATCGCCGT CATCCTGAAC
GACATGGGCG AGGTGAACGT CGACGCCGAG CTGGTCGCGC GAGAGAACGA TGAGGAGGGG
ATCGTCGACC TCTCGAACGG CTGCATCTGC TGTCGGCTGC AGGACGACCT GCTGAGCGAG
GCCGCGACGC TCGCGGAGTC CCGCGAGTTC GACTACCTCC TCGTGGAGTC GTCGGGCATC
TCCGAGCCGA TCCCGATCGC GCGGGCGTTC ACGGAGGGGA CCGAGGACTC CGATATCGAC
CCGACCGAGC GCTTCCGGCT CGACACGATG GTCACCGTCC TCGACACCTA CGGCTTCTGG
AAGGAGTTCG ACGCCGGTGA GAACCTGCCG GGCGACGGGG AGTCGACCGA GGACCGCCCC
CTCGCGGACG TGCTCGTCGA GGGGATCGAG TTCTGCGACG TGCTCGTGAT GAACAAGACG
GATATGGTTC CCGACGACGT GCTCGATGAG ATCGAGTCGG TCGCCGAGCG GCTCGGCCCG
CGGGCGAAGC GGATCCGGAC GAGCTACTCC GAGGTCAACC CTGACGAGGT GCTCGACACC
GGACGGTTCG ACTTCGAGAC GGCCACGCGG TCGCCGGGGT GGAAGCGCGA GATTGCGGAA
AGCGAGGGCG AACACGGTCA CGAGCCAGCA GCCGGCCAGC ACGAACACGA TCACGCCGAG
GGCGCCGCCG CGGCCCACGG CGTCGACTCG TTCGTCTACC GCTCGGCCGA CGCCCTCGAT
CCCGAGTCGT TCGCGAACTG GCTCCACGAC TGGGACGGCG CGATTGTGCG GGCGAAGGGT
GTCGCCAACG TCGCGGGGAC GGACGAGGTC ATCGGCGTGA GTCAGGCCGG TCCCTCGGTG
CAGGCGGGAC CGATCGGCGA GTGGGGGCCC GACGACGACC GCCGCACGCG ACTCGTGTTC
ATCGGCAGCG AGATGGACGA AGCGCGGATC CGCGGAGAGC TCGACGAACT GGCGGCGTCG
AACCCTGAAT CGGTCGAGAA CGCGGACGCG TTCCCGCTCT GA
 
Protein sequence
MSDDRIPVTV LSGYLGAGKT TMVNHLLANP GDRRIAVILN DMGEVNVDAE LVARENDEEG 
IVDLSNGCIC CRLQDDLLSE AATLAESREF DYLLVESSGI SEPIPIARAF TEGTEDSDID
PTERFRLDTM VTVLDTYGFW KEFDAGENLP GDGESTEDRP LADVLVEGIE FCDVLVMNKT
DMVPDDVLDE IESVAERLGP RAKRIRTSYS EVNPDEVLDT GRFDFETATR SPGWKREIAE
SEGEHGHEPA AGQHEHDHAE GAAAAHGVDS FVYRSADALD PESFANWLHD WDGAIVRAKG
VANVAGTDEV IGVSQAGPSV QAGPIGEWGP DDDRRTRLVF IGSEMDEARI RGELDELAAS
NPESVENADA FPL