Gene Hlac_1829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1829 
Symbol 
ID7400021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1839357 
End bp1840373 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content73% 
IMG OID643708899 
Productmevalonate kinase 
Protein accessionYP_002566478 
Protein GI222480241 
COG category[I] Lipid transport and metabolism 
COG ID[COG1577] Mevalonate kinase 
TIGRFAM ID[TIGR00549] mevalonate kinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.516533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCT GTGAAGCGCC GGGGAAGGTG TACCTCTTCG GCGAACACGC CGTCGTCTAC 
GGCGAACCCG CCGTGCCGGC GGCGATCGAG CGACGCGCCA CGGTGACCGC CGAGCCCCGC
TCAGACGACC ACGTCCGCGT CGAGGCCGAG GACCTCTCGC TCAACGGGTT CACCGTCGAG
TACGCCGGCG GTACCGGCGA CCGGCCCGAC GTGGACGTGC CGGCCCCGCT GGTCGAGGCC
GCGATGGGTT ACGTCGACGC CGCGGTCCGG CAGGCCCGGG ACGCGGCTGA CGCGCCCGAC
GCCGGCTTCG ACATCACCGT CGAGAGCGAC ATCCCGCTCG GCGCCGGACT CGGATCGTCG
GCCGCCGTCG TGGTCGCGGG GATCGATGCC GCGACGCGCG CGCTCGGCGA ACCGCTGGAC
CGCCGCGAGC TGGCCGACCG CGCGTACCAC GCGGAGTACG AGGTGCAGGA CGGACAGGCC
TCTCGGGCCG ACACGTTCTG CTCGACGATG GGCGGGGCGG TCCGCATCGA GGGCGACGAC
TGCGAGCCGA TAGAGGCGCC GAACCTTCCG TTCGTCGTCG GTTTCGACGG CGGCGCCGGC
GACACCGGCG AACTCGTCGC CGGCGTCGGC GAACTCCGCG AGGAGTACGG ATTCGCCGCC
GACACCGTCG AGTCGATCGG CGACGTGGTG CGGACCGGCG AGAAGCTGCT CGCCGACGCC
GTTTCGGAGG CCGATCCGTC GCCGGAGCTG CTCGCTGAGC TCGGGGAGCT CATGGACTTC
AATCACGGGC TGCTCTCCGC GCTGGGCGTC TCCGCGCGTT CGCTCGACGC GATGGTGTGG
GCCGCCCGCG ATGCTGGCGC CCACGGCGCG AAGCTCACCG GCGCGGGCGG CGGCGGCTGC
ATCGTTGCGC TCGACGCGAG CGACGCGAGC GAGACCGCGC TCTCCTTCAC GCACGGGTGC
GAGGAGGCGT TCCGCGCGGA GCTCGCGACC GAGGGTGTCC GGGTGGTGGA GCCGTGA
 
Protein sequence
MTVCEAPGKV YLFGEHAVVY GEPAVPAAIE RRATVTAEPR SDDHVRVEAE DLSLNGFTVE 
YAGGTGDRPD VDVPAPLVEA AMGYVDAAVR QARDAADAPD AGFDITVESD IPLGAGLGSS
AAVVVAGIDA ATRALGEPLD RRELADRAYH AEYEVQDGQA SRADTFCSTM GGAVRIEGDD
CEPIEAPNLP FVVGFDGGAG DTGELVAGVG ELREEYGFAA DTVESIGDVV RTGEKLLADA
VSEADPSPEL LAELGELMDF NHGLLSALGV SARSLDAMVW AARDAGAHGA KLTGAGGGGC
IVALDASDAS ETALSFTHGC EEAFRAELAT EGVRVVEP