Gene Hlac_1824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1824 
Symbol 
ID7400016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1835950 
End bp1836129 
Gene Length180 bp 
Protein Length59 aa 
Translation table11 
GC content64% 
IMG OID643708894 
ProductRNA polymerase Rpb6 
Protein accessionYP_002566473 
Protein GI222480236 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAC AGCGATACAA TCGATACGAG AAGGCACGAA TCCTCGGCGC GCGAGCGCTG 
CAGGTGTCCT ACGGGGCGCC CGTGCTGATC GACACGGATC AAACGGAGCC TATCCTCGTC
GCCGCCGAGG AGTACGACGC GGGGGCGCTC CCCTTCACCG TCCGGAGGGA GTCCAACTGA
 
Protein sequence
MSEQRYNRYE KARILGARAL QVSYGAPVLI DTDQTEPILV AAEEYDAGAL PFTVRRESN