Gene Hlac_1823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1823 
Symbol 
ID7400015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1835752 
End bp1835946 
Gene Length195 bp 
Protein Length64 aa 
Translation table11 
GC content64% 
IMG OID643708893 
ProductDNA-directed RNA polymerase subunit N 
Protein accessionYP_002566472 
Protein GI222480235 
COG category[K] Transcription 
COG ID[COG1644] DNA-directed RNA polymerase, subunit N (RpoN/RPB10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATTC CCGTCCGGTG TTTCACGTGC GGCAACGTCG TGGGTGAACA CTGGGAGGAG 
TTCAAAGAGC GCGCCCGCGA GGGCGACGAG GACCCCGGCA AGGTGCTCGA CGAGCTCGGC
GTTGACCGGC ACTGCTGTCG CCGGATGATG GTCAGCCACC GTGACCTCGT CGACGTCGTT
TCGCCGTACC AGTAA
 
Protein sequence
MMIPVRCFTC GNVVGEHWEE FKERAREGDE DPGKVLDELG VDRHCCRRMM VSHRDLVDVV 
SPYQ