| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1819 |
|---|
| Symbol | |
|---|
| ID | 7399695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 1833504 |
|---|
| End bp | 1834256 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643708888 |
|---|
| Product | RNA polymerase insert |
|---|
| Protein accession | YP_002566468 |
|---|
| Protein GI | 222480231 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAAG ACGACTTCGA CGTCCAGTAC GTCGAACGGG ACGATCGCAG CGCGCGGGTG
CTGATCCGCG GGCTCACCCC GGCGTTCGCG AACGGCATCC GCCGCGCGAT GATCGCCGAC
GTCCCGACGT TCTCGATAGA CACCGTCAGG TTCGTCGAGA ACTCCTCCGT CATGTTCGAC
GAGATGATCG GGCTTCGACT GGGGCTCATT CCCCTGAAGA CGCCGCTCGA CGACTTCGAG
GTCGGCGACG AGGTCACTCT CGCGCTCGAC GTCGAGGGTC CGGCGACGGC GTACTCCGGC
GACATCGAGA GCGCGGACCC GCTCGTCGAG GTCGCCGACG ACAATATCCC GATCATCGAG
CTGAAGGAGG GACAGCGACT GGAGTTCGAG GCCGACGCAG TGCTCGACAC CGGTAAGGAG
CACGCCAAAC ATCAGGGCGG CGTCTCCGTC GGCTACCGCC ACCTCCAGCG CGTCTCGGTC
GAGGGCGACC TCGGCGAGTT CGACGACGAC GAGCCGCGGA TCCTCCGCGG GGTTATCGAG
ACACCCGACG GGGAAATCGA ACTTACCGAC GAGTTCGACA ACGATCTCTC GGAGCGGTTC
CCCGGGAAAG AAGTCAGCGT CGAGGATGTC CCCGGCGCGT TCGTGTTCCA CATCGAGACG
GACGGTTCGT TCAGCGTCGA GGAACTGCTG CTCCGCGCCA TCGACTCCAT CGAGGAGCGC
GCGGACGAAC TACAGACGAA AGTCGCGGTC TAA
|
|---|
| Protein sequence | MTEDDFDVQY VERDDRSARV LIRGLTPAFA NGIRRAMIAD VPTFSIDTVR FVENSSVMFD
EMIGLRLGLI PLKTPLDDFE VGDEVTLALD VEGPATAYSG DIESADPLVE VADDNIPIIE
LKEGQRLEFE ADAVLDTGKE HAKHQGGVSV GYRHLQRVSV EGDLGEFDDD EPRILRGVIE
TPDGEIELTD EFDNDLSERF PGKEVSVEDV PGAFVFHIET DGSFSVEELL LRAIDSIEER
ADELQTKVAV
|
|---|
| |