Gene Hlac_1817 details

Gene Information

• Locus tag: Hlac_1817
• Symbol: rps4p
• ID: 7399693
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorubrum lacusprofundi ATCC 49239
• Kingdom: Archaea
• Replicon accession: NC_012029
• Strand: +
• Start bp: 1832579
• End bp: 1833106
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643708886
• Product: 30S ribosomal protein S4P
• Protein accession: YP_002566466
• Protein GI: 222480229
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01018] ribosomal protein S4(archaeal type)/S9(eukaryote cytosolic type)

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCACCG GGAAAAACAC CAAGGGCTAC GAGACGCCGA ACCACCCGTA CCAGGGCGAG 
CGCATCGCCG AGGAGTCCGA TCTCCTCTCA CGGTACGGTC TGAAGAACAA AGAGGAGTTC 
TGGCGCGCTC AGTCCGAGCT GCGTAGCATG CGCCGCGAGG CGCGTCGCCT GCTCGGCGAG 
GCCCAGGGTG ACGTCGACGT CGCTCAGGAG GCCGGCGCAG AGTTCGTCGC ACGGCTCCGC 
CGGATCGGTA TCCTCGGCGA CAACGACGAT ATCTCCGCGG TCCTCTCACT GGACGTGACC 
GACCTGCTCG AGCGCCGTCT CCAGACGGTC GCCTACCGAC AGGGGTTCGC GTCCTCGACT 
CAGCAGGCCC GACAGTTCAT CGTTCACGGC CACATCACCG TCGACGGCGC CCGCGTCACG 
CGCCCGTCGG TGAAGGTCGA CGTGGACGAC GAAGGCGCAA TCGCCTTCGA CGAGAACAGC 
CCGCTCGCGG ACGATCTCCA CCCCGAGCGC GCGGAGTCAC AGGAGTAA 

 

Protein sequence

MSTGKNTKGY ETPNHPYQGE RIAEESDLLS RYGLKNKEEF WRAQSELRSM RREARRLLGE 
AQGDVDVAQE AGAEFVARLR RIGILGDNDD ISAVLSLDVT DLLERRLQTV AYRQGFASST 
QQARQFIVHG HITVDGARVT RPSVKVDVDD EGAIAFDENS PLADDLHPER AESQE