Gene Hlac_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1797 
Symbol 
ID7399670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1811369 
End bp1812373 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content71% 
IMG OID643708863 
Producthypothetical protein 
Protein accessionYP_002566446 
Protein GI222480209 
COG category[S] Function unknown 
COG ID[COG1711] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG ACGAGCTCAG ATCGGCCCAA GCGAAGGAAC GCCGCAAGGA CAGCCTCCAG 
CACCTGCGGG ACTCCTTTTA CGACGACGTG GCCGCCTACG TCGCCGACCT GCGCGCGGCC
CGCGACCGCC GCGCCGAGCA GGTCGCAAAG CCGTTCTCCG ACGACGACGT GCGGCGGATG
TCGGACGAGG TCGAGACCGC CGAGGAGGTT GCGGAGGCGC TGTACGAGCG TCGCGTCGGC
AAGGTCGTCA AGCTCGCGTC GTTCGCGGCG GCGGACATGC CGGTCGACGC CGACGGCATG
ACCACGGAGG AACGACAGCT GTTCGACGAC CTCGTCGACC GGATCAGCGA GAACAAGTCC
CGCGTGCTCG ACGTGCTCGC CGGCGAGGCA CCTCCGGCGT CGACTGACGC CGTACCGACG
GACGACGCGA CACCGCTGGG AGATGCGACG AACGCGCCCC CGTCGACGGA CGAGAGCGCC
ACCGCAGACT CGGCCCCGCC CGCGCCGGAT CCCGAGCCCC CGGCCGAAAC GCCGTCTGGC
GAAGACGACG AAGCCCCCGG GACCGGGGAG AGCGCCGACG CGCTCGCGGG CGCCATGGGC
AGTTCGGACG ACGAGGTGGC CGACGCCCTC GACGCCACGA CCGATGTCAC GACTGACGGC
GAGTCACGGG CGACCGACGG TTCGCCAGCA GACGGTAACG CAACCGCTGA CGACGCGTCC
GCTGGCGACG GTCCGACACC GGTTCCGCCG GAGCCCGCCC CGCCGGGAAC ACCGGGCACG
GACGCGAGCG ACGACCCAGC CGAGAGCGAC GACGAAGCGA CCGCAGACAC TGCAGACGCC
GCCGACTCCT CCGACCGCGC CACGGTCAGG ATCACCCGCG ACGTGGGGGC GATATTCGGA
GTCGACGAGC GGGAGTACGA CCTCGCAAAC GAGGATGTCG TGACCCTTCC CGCCGAGAAC
GCGGACCCGC TGGTTCAGCG GGACGCCGCG GAACGGCTCG ACTGA
 
Protein sequence
MKLDELRSAQ AKERRKDSLQ HLRDSFYDDV AAYVADLRAA RDRRAEQVAK PFSDDDVRRM 
SDEVETAEEV AEALYERRVG KVVKLASFAA ADMPVDADGM TTEERQLFDD LVDRISENKS
RVLDVLAGEA PPASTDAVPT DDATPLGDAT NAPPSTDESA TADSAPPAPD PEPPAETPSG
EDDEAPGTGE SADALAGAMG SSDDEVADAL DATTDVTTDG ESRATDGSPA DGNATADDAS
AGDGPTPVPP EPAPPGTPGT DASDDPAESD DEATADTADA ADSSDRATVR ITRDVGAIFG
VDEREYDLAN EDVVTLPAEN ADPLVQRDAA ERLD