Gene Hlac_1783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1783 
Symbol 
ID7399656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1801342 
End bp1802106 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content67% 
IMG OID643708849 
Producthypothetical protein 
Protein accessionYP_002566432 
Protein GI222480195 
COG category[L] Replication, recombination and repair 
COG ID[COG3359] Predicted exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.184707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG AGAACAGCTT CATCCCGGTC GAAGGGGTCG GCGAGACGAC GGAGCGTCGG 
ATCTGGCGCG AGGGCGTCAC CACGTGGGAG TCGTTCGACC CCGCCGTCGA CGTCGCGGGC
GTCGGCTCGA CCACTGCCGA CCGGATCGAG TCGTTCATCG CCGAGGCGCT GACGCACCTC
GACGACGGCG ACTCCGCTTA CTTCGACCGC ACCTTCCCCA GCGGGGAGCG CTGGCGGCTC
TACGAGAACT TCCGCGAGGA GACCTGCTTT TTCGACATCG AGACGACCGG CCTCGACGAA
CACCGCGATC GGGTGACGAC GGTGAGCTTC CACCGGGACG GGGAGACGAC CACGCTCGTC
GCCGGCGAGG ATCTCACCGC GGAGCGGCTC CGCGAGCAGT TCGCCGACGC CAGCCTGCTC
GCGACGTTCA ACGGCGCCCG GTTCGATGTT CCCTTCCTCG AGACCGCCTT CGACATCGAG
ATCGACACGC CCCACCTCGA TCTCATGTAC CCCTGCAAGC GGATCGGACT CTCTGGAGGG
CTGAAGCCGA TCGAGAAGGA AATCGGGATC GAGCGCGACC GCCCGGACCT CTCGGGCCGG
GACGCCGTCC GGCTCTGGCG CGAGTACGAA CGCGGCGACG ACGACGCGCT CGATACCTTG
GTCTCGTACA ACCGCGAGGA CACGAAGAAC CTCCGGACCC TCGCAGACAC CGTCACCGAG
ACGCTCCACG AGGACGTGTT CGTCGGCGAA ACTGTTGAGC GGTAG
 
Protein sequence
MRIENSFIPV EGVGETTERR IWREGVTTWE SFDPAVDVAG VGSTTADRIE SFIAEALTHL 
DDGDSAYFDR TFPSGERWRL YENFREETCF FDIETTGLDE HRDRVTTVSF HRDGETTTLV
AGEDLTAERL REQFADASLL ATFNGARFDV PFLETAFDIE IDTPHLDLMY PCKRIGLSGG
LKPIEKEIGI ERDRPDLSGR DAVRLWREYE RGDDDALDTL VSYNREDTKN LRTLADTVTE
TLHEDVFVGE TVER