Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1783 |
Symbol | |
ID | 7399656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1801342 |
End bp | 1802106 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643708849 |
Product | hypothetical protein |
Protein accession | YP_002566432 |
Protein GI | 222480195 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3359] Predicted exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.184707 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATCG AGAACAGCTT CATCCCGGTC GAAGGGGTCG GCGAGACGAC GGAGCGTCGG ATCTGGCGCG AGGGCGTCAC CACGTGGGAG TCGTTCGACC CCGCCGTCGA CGTCGCGGGC GTCGGCTCGA CCACTGCCGA CCGGATCGAG TCGTTCATCG CCGAGGCGCT GACGCACCTC GACGACGGCG ACTCCGCTTA CTTCGACCGC ACCTTCCCCA GCGGGGAGCG CTGGCGGCTC TACGAGAACT TCCGCGAGGA GACCTGCTTT TTCGACATCG AGACGACCGG CCTCGACGAA CACCGCGATC GGGTGACGAC GGTGAGCTTC CACCGGGACG GGGAGACGAC CACGCTCGTC GCCGGCGAGG ATCTCACCGC GGAGCGGCTC CGCGAGCAGT TCGCCGACGC CAGCCTGCTC GCGACGTTCA ACGGCGCCCG GTTCGATGTT CCCTTCCTCG AGACCGCCTT CGACATCGAG ATCGACACGC CCCACCTCGA TCTCATGTAC CCCTGCAAGC GGATCGGACT CTCTGGAGGG CTGAAGCCGA TCGAGAAGGA AATCGGGATC GAGCGCGACC GCCCGGACCT CTCGGGCCGG GACGCCGTCC GGCTCTGGCG CGAGTACGAA CGCGGCGACG ACGACGCGCT CGATACCTTG GTCTCGTACA ACCGCGAGGA CACGAAGAAC CTCCGGACCC TCGCAGACAC CGTCACCGAG ACGCTCCACG AGGACGTGTT CGTCGGCGAA ACTGTTGAGC GGTAG
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Protein sequence | MRIENSFIPV EGVGETTERR IWREGVTTWE SFDPAVDVAG VGSTTADRIE SFIAEALTHL DDGDSAYFDR TFPSGERWRL YENFREETCF FDIETTGLDE HRDRVTTVSF HRDGETTTLV AGEDLTAERL REQFADASLL ATFNGARFDV PFLETAFDIE IDTPHLDLMY PCKRIGLSGG LKPIEKEIGI ERDRPDLSGR DAVRLWREYE RGDDDALDTL VSYNREDTKN LRTLADTVTE TLHEDVFVGE TVER
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