Gene Hlac_1782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1782 
Symbol 
ID7399655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1800486 
End bp1801229 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content70% 
IMG OID643708848 
Productprotein of unknown function DUF159 
Protein accessionYP_002566431 
Protein GI222480194 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.178705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGCC GCTACACCCT CTTTACTCCC GCTACCGACC TCGAAGCCCG ATTCGACGCC 
GACTTCGCGG GCGTCGAGCC GAGGTACAAC TGCGCGCCCG GGCAGGACCT CCCGGTGATC
GCTGACGAGG ACCCGACCGT CGCGACGCGG ATGGAATGGG GACTGACCCC CTCGTGGGCC
GACGAGTCGT TCGACCTGAT CAACGCCCGC GCGGAGACGG TCAGCGAGAA GCGGAGTTTC
GCCGACGCCT TCGAGCGGCG GCGGTGTCTC GTCCCCGCGG ACGGGTTCTA CGAGTGGGTC
GATGGGGGCG GTCCCGACAG TGACGTGAAC CGCGGCGGCG GCGGAACAAC CCCCTACCGC
GTCGCCTTCG AGGACGATCG ACTGTTCGCG ATGGCGGGGC TCTACGAGCG GTGGGAGCCG
CCCGAACCGG AGACGACGCA GACGGGACTC GGAGCGTTCG GCGGCGGGGC GGGCGAGGAC
GACGATTCAG ACGACGGCGG CGGACCCATA GAGACGTTCA CAATCGTGAC GACCGAGCCG
AACGATCTCG TCGCCGACCT CCACCACCGG ATGGCGGTGA TCTTGGAACC GGACGAGGAG
GCGACGTGGC TCCGCGGTGC CCCCGACGAG GCCGCCGCGC TACTGGACCC GTATCCGGCC
GACGAGCTAA CCGCGCACCC GGTGTCGACG CGGGTGAACT CTCCCGCCGT CGACGCGCCG
GAGCTGATCG AACCGGTCGG CTGA
 
Protein sequence
MCGRYTLFTP ATDLEARFDA DFAGVEPRYN CAPGQDLPVI ADEDPTVATR MEWGLTPSWA 
DESFDLINAR AETVSEKRSF ADAFERRRCL VPADGFYEWV DGGGPDSDVN RGGGGTTPYR
VAFEDDRLFA MAGLYERWEP PEPETTQTGL GAFGGGAGED DDSDDGGGPI ETFTIVTTEP
NDLVADLHHR MAVILEPDEE ATWLRGAPDE AAALLDPYPA DELTAHPVST RVNSPAVDAP
ELIEPVG