Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1767 |
Symbol | |
ID | 7399639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1784914 |
End bp | 1785633 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643708832 |
Product | hypothetical protein |
Protein accession | YP_002566416 |
Protein GI | 222480179 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00475072 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCTGACG CCTTCGGACG CGCGATCCGC GATCATCACC GTGGTGACCG GACTACCCCT CTCCGACAGG GCGACGGCGA GGAGACGCGT GAACACCCGA TCGGGGCGTT CTACTTCGAC GCGTTCGACG CCGAGAGCAA CGCGGGTTCG TGGCTCACAT CGCGGCTTTC GGGCCCGCTC GTCGACCTCG GAGCGGGGGC GGGCCGGCAC GCGCTGCGGT TTCAAGGGCG GTTCGAGACA GTTGCGGTCG AGACCAGCCC AGCACTCGTC GAGGCGATGC GCGACCGCGG CGTCGTGGAT GTCCGCGAGG GCGACATGTT CGCCCTCCGA GACGCGTTCG AGCGGGATCG GTTCGCGTCG GCGCTCGCGA TCGGCACGCA GATCGGACTG GCGGGCTCGA TGCGAGGGCT CTCGGCATTT CTCGGCGACC TCGCGTTCGT GACGACGCCC GGCGCGACGG CCGTGATCGA TTCTTACGAC CCGGATCACC CCGGAGCCGC TGACCTCCTC GGGTACCGCG AGGACCCGAC GCCGGGGCTC GCGCATCGCG TCATGTGGTT CGCGTACGAC GGGGAGACGG ACCCGACGCT CCATTTCAGG CTGTTCGCCC CCGACCGGCT CCGCGAAGCG GCGATCGGGA CGGGATGGGA GGTCGAGGCG GTGGACCGCG AGGGGACCGG AGACGGGCCC CACTACCGGG CCGCGCTCCG GAAGCGGTAG
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Protein sequence | MPDAFGRAIR DHHRGDRTTP LRQGDGEETR EHPIGAFYFD AFDAESNAGS WLTSRLSGPL VDLGAGAGRH ALRFQGRFET VAVETSPALV EAMRDRGVVD VREGDMFALR DAFERDRFAS ALAIGTQIGL AGSMRGLSAF LGDLAFVTTP GATAVIDSYD PDHPGAADLL GYREDPTPGL AHRVMWFAYD GETDPTLHFR LFAPDRLREA AIGTGWEVEA VDREGTGDGP HYRAALRKR
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