| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1763 |
|---|
| Symbol | |
|---|
| ID | 7399635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 1779260 |
|---|
| End bp | 1780240 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643708828 |
|---|
| Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
|---|
| Protein accession | YP_002566412 |
|---|
| Protein GI | 222480175 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.629074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0111881 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCC ATCGGGAGCC CCTGTCGTCG GTGTTGGAGA CGATCGGGGA GACGCCGCTC
GTTCGGGTAC ACGACTCCCC GGACGCGGTG CCGGTGTACG CGAAGTTGGA GTCGTTCAAC
CCCGGTGCGA GCATCAAGGA CCGCATCGGG AAGTACATGC TCGAACGCAT GCTCGAACGC
GGCGACGTGG GGGAGGGTGG CACCGTCGTC GAGCCGACCG CGGGCAACAC CGGGATCGGG
CTCGCGGTCG CGGCCAAGCA GTTAGGGCTG AACGCGGTGT TCGTCGTTCC AGAGCGATTC
TCGGTGGAGA AACAGCAGCT CATGCGCGCG CTCGGCGCGG AGGTGGTCAA CACCCCGAGC
GAGGACGGAA TGGGGTTCGC CATCGACCGT GCCCACGAGA TCGCCGACGA GCTCGACGAC
GCGGTCGTCC CCCAGCAGTT CTCGAACCCG CTCAACGCCG AGGCCCACTA CGAGACGACC
GCCCCCGAGA TCGACGAGGC GCTCGACGGG GAGGTGGGCG CCGTGGTCGC CGGCTGCGGC
ACCGGCGGGA CGCTGATGGG GATGGCTCGC TACTTCCGCG AGCGCGACCC CGATACCTAC
GTCGTCGCCG TGGAGCCCGC CGGCTCCGCG TACCGCGAGT TCCTCGGCGA GGAGGTCGCC
CACGAGGAGT ACAAGACGGA GGGGATCGGC ACCCACGACA TCGACACCAA CGAGCTGTTC
GACCCGGCCC TCGTCGACGA CATCCAGGCC GTCCCCGACC GTGAGGTCCA CGAGGAGATG
GGGCGGCTCG CGGCCGAGGA GGGACAGCTC GTCGCCTCCT CCGCGGCCGC GAACGCGATC
GCGGCCAAGC GAGTCGCTCG GGCGATTCGC GACGGCGAGA TAGACGCCCC GTACGACACG
GTCGCCACCG CGTTTCCGGA CTCCTCGGAG CGGTACCTCT CGAAGGGCGT GTACCGGTCC
TTCGAGGAGT GGGAAGGGTA G
|
|---|
| Protein sequence | MTTHREPLSS VLETIGETPL VRVHDSPDAV PVYAKLESFN PGASIKDRIG KYMLERMLER
GDVGEGGTVV EPTAGNTGIG LAVAAKQLGL NAVFVVPERF SVEKQQLMRA LGAEVVNTPS
EDGMGFAIDR AHEIADELDD AVVPQQFSNP LNAEAHYETT APEIDEALDG EVGAVVAGCG
TGGTLMGMAR YFRERDPDTY VVAVEPAGSA YREFLGEEVA HEEYKTEGIG THDIDTNELF
DPALVDDIQA VPDREVHEEM GRLAAEEGQL VASSAAANAI AAKRVARAIR DGEIDAPYDT
VATAFPDSSE RYLSKGVYRS FEEWEG
|
|---|
| |