Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1759 |
Symbol | |
ID | 7399630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1775488 |
End bp | 1776654 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643708824 |
Product | transposase (ISH3) |
Protein accession | YP_002566409 |
Protein GI | 222480172 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3385] FOG: Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00951972 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0115894 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTAAAA CCAAACAAGC AGACGGTGAG ATCCACGAGG ACCAGCTTCT TAACTTTCTC GTCAACCGCC TTGACGAGGA AGTTTCGCTC TCGTTAGCCA ATAACGCTGA AATCACTGCT GAAGACATCT ATGAGGTCCT CGTCGGCGCT TGCGCCGACG GGACCTCTGT CTCTACGCTC TGTGCGTCGA GCCAGAACTC ACCCGCTGGG AACACGGTCC TCTACCATCT TCGGACGAAG TTCGAGCCGG AACGGCTCGA ACGAGTCGCT AACACGCTCC TGCGAAAGGA TCTCGATGAA TTGCTCCCCG AACAGGTGGA GGTCTGCGCA GACCTCCACC TGCGGCCCTA CTACGGTGAC GAAGACGACA CAGACGGCCT CTATCACTCG GTAGCGAAGC GTGGAACCAC TGCGTTCCAC GCCTATGCCA CACTCTACGC GCGTGTGAAG AACAAACGCT ACACGCTGGC GGTACGCCGT CTCAAAGACG GCGATACCGC AAGTAGTGTC CTCGCTGAGT TCTTCGGTGT CCTCGACGGC CTTGACGCCG GGGTCAAGGC CGTCTACCTT GATCGCGGAT TCTACGACAG TAAGTGTCTC ACGCTGCTTC AGGCGCACAA TTACGCGTAC GTGATCCCGA TCATCCGGTG GGGTGAGGCG ATTCAGCAAG AGCTCTCGGA AGGATGGAGT CGCGTCATTC AGCATGATCT GACGGGGAAA CTCGACGGTC ACAGCTGGAC CGTCGATTTT CCCGTCTACA TCGACTGTAC GTACCTAAAT GGGAAGTATG ACGAGAACGG TGTGGCGCGT CACGGCTACG CCGCTGACGC GCCGTTCATC GACTCACCAC GGGACGCTCG ATACCACTAC TCGAAACGCT TCGGTATCGA GTCAAGCTAT CGCTTGTTTG AGCAAGCGAT AGCGACAACG ACAACACGAG ATCCAACGGT ACGGCTGCTG TACGTGGTGG TGAGTCTCCT CTTACAGAAC GTCTGGCGGT ACCTTCACTA CGAGTATGTG GCGACGCCCC GCCGAGGCGG GCGTCGCCTC TGGTGGTGGC CGTACAAGGA GTTCGTCAAT ATGATTCGAC GAGCTGCGTG GACGGCCCTC GCGGTGCGTC GGGCCGTCCC CGCGAATCGG CCACCTGACG ACCGATTCCA CCGCTAA
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Protein sequence | MSKTKQADGE IHEDQLLNFL VNRLDEEVSL SLANNAEITA EDIYEVLVGA CADGTSVSTL CASSQNSPAG NTVLYHLRTK FEPERLERVA NTLLRKDLDE LLPEQVEVCA DLHLRPYYGD EDDTDGLYHS VAKRGTTAFH AYATLYARVK NKRYTLAVRR LKDGDTASSV LAEFFGVLDG LDAGVKAVYL DRGFYDSKCL TLLQAHNYAY VIPIIRWGEA IQQELSEGWS RVIQHDLTGK LDGHSWTVDF PVYIDCTYLN GKYDENGVAR HGYAADAPFI DSPRDARYHY SKRFGIESSY RLFEQAIATT TTRDPTVRLL YVVVSLLLQN VWRYLHYEYV ATPRRGGRRL WWWPYKEFVN MIRRAAWTAL AVRRAVPANR PPDDRFHR
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