Gene Hlac_1745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1745 
Symbol 
ID7399616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1759291 
End bp1760337 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content69% 
IMG OID643708812 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_002566397 
Protein GI222480160 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR00978] aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.405709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTAC GAGTCGGCAT CCTTGGCGCC ACCGGCGCCG TGGGACAGCG GTTCATCCAG 
TTGCTCGACG ACCACCCGAC CTTTGACCTC GCCGCGGTCA CCGCCAGCGC GGACAGCGCG
GGCAAGACCT ACCGCGAGGC CGCCAAGTGG CGCGTGGACA CACCCATCCC GGACGACGTC
GCCGAGATGG AGGTCACGGA GACGACGCCC GCGGGAATCG CGGACGCCGA CGTGGACCTC
CTCTTCTCGT CGCTCCCCTC GGGTGTCGCG AGCGAGGTCG AGCCCGCGTT CTTGGAGGAG
GGATACGTCG TCTCCTCGAA CTCATCGAAC GATCGCATGG CGGCCGACGT GCCGCTGACG
ATCCCCGAGA TCAACCCCGG TCACCTCGAC CTGATCGAGG TCCAGCGCGA CGAGCGCGGC
TGGGACGGCG CCCTCGTGAA GAACCCGAAC TGCTCGACGA TCACGATGGT CCCCACCCTC
GCAGCGATCG ACGAGTTCGG CTTGGAGAGC GTCCGGGTCT CGACCCTGCA GGCGGTCTCC
GGCGCCGGCT ACTCCGGCGT TACCTCGATG GAGATCATCG ACAACGCCAT CCCGCACATC
GGCGGCGAGG AGGAGAAGAT GGAGACGGAG TCGCGCAAGC TTCTCGGCGA ATTCGACGGC
GCGGAGGTCC ACCTCCACGG CGCCGACGTG GCCGCCTCCT GTAACCGGAT CCCGACGCTC
GACGGTCATC TTGAGAACGT CTTCGCCGAG TTCGCCGAGG ACCCGTCGCC CGCTGACCTC
CGCGAGGCAA TGCGCTCGTT CGAGGGCGCC GCCGCGCTCC CCAGCTCGCC CGACCAGCTC
ATCAAGGTGT TCGGCGAGGA CGAGCCGGAG CGCCCCCAGC CCCGCCTCGA CCGCACGTAC
GCGGGCGGGA TGGGCATCGT CGCCGGCGGC GTGCAGGCGA CGAACGCCGG CATGAAGTAC
AACTGCCTCG CGCACAACAC GATCCGCGGC GCGGCGGGCG CCTCGCTGCT CAACGGCGAG
CTGCTCGTCG AGGAAGGGTA CGTCTAA
 
Protein sequence
MSVRVGILGA TGAVGQRFIQ LLDDHPTFDL AAVTASADSA GKTYREAAKW RVDTPIPDDV 
AEMEVTETTP AGIADADVDL LFSSLPSGVA SEVEPAFLEE GYVVSSNSSN DRMAADVPLT
IPEINPGHLD LIEVQRDERG WDGALVKNPN CSTITMVPTL AAIDEFGLES VRVSTLQAVS
GAGYSGVTSM EIIDNAIPHI GGEEEKMETE SRKLLGEFDG AEVHLHGADV AASCNRIPTL
DGHLENVFAE FAEDPSPADL REAMRSFEGA AALPSSPDQL IKVFGEDEPE RPQPRLDRTY
AGGMGIVAGG VQATNAGMKY NCLAHNTIRG AAGASLLNGE LLVEEGYV