| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1727 |
|---|
| Symbol | |
|---|
| ID | 7400484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 1744262 |
|---|
| End bp | 1745161 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643708794 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002566380 |
|---|
| Protein GI | 222480143 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2836] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.029658 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGAAC TCGGGGCCGG CGTCGACTCG CTGGCCCGTC AGACACTCGT CCCCGCGACG
GCGACGTGTG AGCCAACCGG GACGATCCAC TCCGCCGAAC CGCTGAGTCT CGGCGTGTTC
CTGCTCGTCG GGCTCCTCGG CGGCGCCCAC TGTCTCGGAA TGTGCGGGCC GCTGGTCTCG
ACGTACGCGG ACCGGATGCG ATCCGACGCC GCCGCCGACG GTAACGGCGG TAACGGCGGC
CCAGAGAGGA CCGCACGAGC CGGCGGAAGC GACGATCTCA CCGTGCGACA GGTGCGCCAA
CACGCGCTGT TCAACCTCGG ACGAACGGCG AGCTACGCCG CGATCGGCGG GCTGTTCGGC
CTCGCGGGGA GCCTCGCGTT CGTCACCGGC CGGACGGTGA CGACGGTCGC CGACGACGTC
CACGCGCTCA CGGGATTGGT CGTCGGTGCG GTCGTCATCG CGATCGGCGT GCGGTACGCC
CTCCGACTGG AGCTCCAGCG TATTCCGGTT CCCGGGATCG AAGCCGCCTC GGGGGTCGTC
ACCGGCCGGA TCGTCCCCCG AATTGATGCG TGGGTCGGCA ACTGGCGGAT CGTCGGGCTC
GGCGCCGCGC ACGGGCTCTT ACCGTGTCCC TTGCTGTACC CGGCGTTCCT GTACGCGTTC
GTGCAGGGCA GCGCGCTCGG CGGCGCGGCC GCGCTCGCCG CGCTCGGGCT CGGTACCGTG
CCGGCGCTGT TCCTCTTCGG AACCGTGTTC GGGTCCGTGA GCGTCGACAC GCGGATGCGA
CTCCACCGCG CGCTGGGTGT CGCCTTCGTC GCGCTCGGGT ACATCCCGCT TCAGCACGGC
CTCGCGACGC TCGGCGTCCC GCTGCCGCAC CCGCCGATCC CGTACTACTC GCCGTTATAA
|
|---|
| Protein sequence | MRELGAGVDS LARQTLVPAT ATCEPTGTIH SAEPLSLGVF LLVGLLGGAH CLGMCGPLVS
TYADRMRSDA AADGNGGNGG PERTARAGGS DDLTVRQVRQ HALFNLGRTA SYAAIGGLFG
LAGSLAFVTG RTVTTVADDV HALTGLVVGA VVIAIGVRYA LRLELQRIPV PGIEAASGVV
TGRIVPRIDA WVGNWRIVGL GAAHGLLPCP LLYPAFLYAF VQGSALGGAA ALAALGLGTV
PALFLFGTVF GSVSVDTRMR LHRALGVAFV ALGYIPLQHG LATLGVPLPH PPIPYYSPL
|
|---|
| |