Gene Hlac_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1726 
Symbol 
ID7400483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1743665 
End bp1744168 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content71% 
IMG OID643708793 
Producttranscriptional regulator, ArsR family 
Protein accessionYP_002566379 
Protein GI222480142 
COG category[S] Function unknown 
COG ID[COG3398] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0364777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGACA CCAGAGCCCG GATCCGCCGA CACGTCCGCG AGACGCCGGG CGTCCACTTC 
AACCGGGTGG GCCGCGACCT CGACATCGCC ACCGGACAGG CGCAGTACCA CCTCCGTCGG
CTCGTCCGCG ACGGCGAGAT CGCGGTCGAG CGGATCGGCG GACGCGCCCA CTACTTCGAC
CCGGCCTTCG ACCCGTGGGA GCGGCGGACC GTCGCCTTCC TCCGGCGGGA GACCGCCCGC
GAGATCCTCG TTCGGCTCCA CGCCGACGGC CCGACTCGGT CGACGACGCT CGCGGACGAG
CTCGACCTCG CACGCAGCAC CGTCTCCTGG CACGTCTCGA ACCTGGTCGA GAGCGGGATC
GTCGAGAAGT CCGACGAGCG ACCCATGCAC CTCTCGCTCG CGTTCCCCGA GCGGACCGCG
ACGCTCTTCG ACGAGGTGTC GCCGTCGCTC CCGGACCGGA TCGTCGACCG GTTCGTTCGG
ACCGTCGACA GCCTGTTCGA GTGA
 
Protein sequence
MPDTRARIRR HVRETPGVHF NRVGRDLDIA TGQAQYHLRR LVRDGEIAVE RIGGRAHYFD 
PAFDPWERRT VAFLRRETAR EILVRLHADG PTRSTTLADE LDLARSTVSW HVSNLVESGI
VEKSDERPMH LSLAFPERTA TLFDEVSPSL PDRIVDRFVR TVDSLFE