| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1723 |
|---|
| Symbol | |
|---|
| ID | 7400480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 1741340 |
|---|
| End bp | 1742314 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643708790 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002566376 |
|---|
| Protein GI | 222480139 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0159508 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGACG AGACCGTCGC CGCCCTGTCG GATGTCACCC GGACGTACGG CGGCGTGCCG
GTACTCGACT CGGTGTCGCT TACGGTCGAA CCGGGTCTCA CCGCCGTGAT CGGCCCGAAC
GGATCTGGAA AGTCGACCCT CCTCGGAGTG CTCGTCGGCG CGACGGCGCC GACAGCGGGT
GAGGTCCGCC ACCCCGGCGC GACCGGGCCG AAGCCGATCG GGTACCTCCC GCAGCGGGTG
CCATTCCGCG AGGGGTTCAC GGCCCGCGAG ACGCTCGCGT TCTACGCGCG CCTCGTCGGC
GACGACCCGG ACGCGGCGCT CGACCGGGTC GGGCTCGGCG ACGCCGGCGA TCGGCGCGTC
GAGGCGCTCT CGGGCGGCAT GCGTCGCCTG CTCGGCATCG CGCAGGCGGT CCTCGGCGAC
CCCTCGCTCG TGGTCCTCGA CGAGCCGGCG AGCGGTCTCG ACCCGGGGAT GCGCGAGCGC
GCGTTCCGCG CGGCCGCCGA TCAGGCCGAC GGCGACACCG CGGTCGTGGT TTCCTCGCAC
GCGCTCGACC TCGTCGACGA CCACGCCGAC CGCGTCGTGG TCCTCCGTCG CGGGGAGGTC
GCCGCCGAAG GACCCCTCGA CCGGCTGCTC GACGAGCACG GCGTCGCCAA CGCGAGTGAG
CTGTACCGCG TCGTGATTGG GGAACTGGGT GCGCCGGCAG GAGATGAAGG CGAGGGGCCC
GACGACGAGG ACGAGAGCGA CGGAGAGAGT GACGACGGTG ACGATGAGGG CGAAAGCGAC
GGTGACGATG AGGGCGAAAG CGACGGCGAC GATGAGGGCG AAAGCGACGG TGACGATGAG
GGCGAAAGCG ACGGTGACGA TGAGGGCGAA AGCGACGGTG ACGATGAGGG CGAAAGCGAC
GGTGACGATG AGGGCGAAAG CGACGGCGAC GAACCGGAGC CGACGGTCCA CGTCACGGGG
GTGTCGGACC GATGA
|
|---|
| Protein sequence | MPDETVAALS DVTRTYGGVP VLDSVSLTVE PGLTAVIGPN GSGKSTLLGV LVGATAPTAG
EVRHPGATGP KPIGYLPQRV PFREGFTARE TLAFYARLVG DDPDAALDRV GLGDAGDRRV
EALSGGMRRL LGIAQAVLGD PSLVVLDEPA SGLDPGMRER AFRAAADQAD GDTAVVVSSH
ALDLVDDHAD RVVVLRRGEV AAEGPLDRLL DEHGVANASE LYRVVIGELG APAGDEGEGP
DDEDESDGES DDGDDEGESD GDDEGESDGD DEGESDGDDE GESDGDDEGE SDGDDEGESD
GDDEGESDGD EPEPTVHVTG VSDR
|
|---|
| |