| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1716 |
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| Symbol | |
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| ID | 7400473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1730790 |
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| End bp | 1733012 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643708783 |
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| Product | AAA family ATPase, CDC48 subfamily |
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| Protein accession | YP_002566369 |
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| Protein GI | 222480132 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAG TCCAACTCGA AGTGGCGAAA GCGTACCCGA ACGACTCGGG TCGCGGCATC
GCCCGACTCG ACCCCGATAC GCTGTTGCAC CTCAAGCTCT CGCCCGGCGA CATCATCGAG
ATCGAGGGCG CGGAGACGAC CGCCGCCAAG GTCTGGCGCG CCGACCGCCA GGACTGGAAC
ACGGACACGG TCCGCGTCGA CGGCTTCACC CGTCAGAACG CCGACGTGGG CATCGGCGAG
CGCGTGACGA TCCGGAAGGC GGAGGCCGAA AAAGCCGAGA AGCTCGTCTT GGCTCCGCCC
GAGGAGGCGT CCGTCCAGTT CGGCTCCGAC GCCGCTGGCA TGGTGAAACG CCAGATCCTC
AAGCGGCCGG TCGTCGAGCG CGACATCGTT CCCGTGATGT CGTCGACGAA CCACCCGTTC
ATGCGATCGC CCGGACAGGC GATCCCGCTA ATCGCGGTCG ACACCGAGCC CGACGGCGTC
TGTCTGATCA CCGAGGACAC CGAAGTCGAA CTGCGCGAGG AGCCGATCTC CGGGTTCGAG
AAGACCGGCA GCGGTATCAC CTACGAGGAT ATCGGCGGGC TCCAGTCGGA GATCCAGCGC
GTCCGCGAGA TGGTCGAGCT GCCGATGAAA CACCCGCAGA TCTTCTCGAA GCTCGGGATC
GAGCCGCCGC AGGGCGTCCT CCTGCACGGC CCGCCGGGCA CGGGGAAGAC CCTGCTCGCG
AAGGCGGTCG CCAACGAGAC GAGCGCGTCG TTCTTCTCGA TCGCCGGCCC GGAGATCATC
TCGAAGTACT ACGGCGAGTC CGAACAGCAG CTCCGAGAGA TCTTCGAGGA CGCGAAAGAG
GAGAGCCCGA GCATCATCTT CATCGACGAG CTCGACTCGA TCGCGCCGAA GCGCGAGGAC
GTGACCGGCG AGGTTGAGCG CCGCGTCGTC GCGCAGCTGT TGACGATGAT GGACGGCCTC
GAAACGCGCG GACAGGTGGT CGTCATCGGC GCGACGAACC GCGTCGACAG CGTCGATCCC
GCACTCCGGC GCCCCGGGCG CTTCGACCGC GAGATAGAGA TCGGCGTCCC CGACGAGGTG
GGTCGCAAGG AGATCCTCCA GATCCACACC CGCGGGATGC CGCTCTCGGA CGACGTCTCT
CTCGATCACC TCGCCGACGA GACGCACGGG TTCGTCGGCG CCGACATCGA GAGCCTCACG
AAGGAGGCCG CGATGAAGGC GCTTCGGCGG TACCTCCCCG AGATCGACTT AGACGACGAG
GAGGTCCCGC CGAGCCTCAT CGACCGGATG ATCGTCAAGC GCGACGACTT CGGTGCCGCG
TTAAATGAGG TGGAGCCCTC CGCGATGCGC GAGGTCCTCG TCGAGCTCCC GAAGATATCG
TGGGACGACG TCGGTGGGCT CAGTGAGGCC CAACAGCAGG TTCAAGAATC CGTAGAGTGG
CCGCTCAGCT CGCCGGAGAA GTTCGACCGG ATGGGCGTCG ACCCCCCGAA GGGCGTGCTG
CTGTACGGCC CGCCCGGCAC CGGGAAGACG CTGATGGCGA AGGCGGTCGC CAACGAGACG
AACGCGAACT TCATCTCGGT CAGGGGGCCA CAGCTGCTCT CGAAGTGGGT CGGCGAGTCG
GAGAAGGCGA TCCGGCAGAC CTTCCGGAAG GCCCGGCAGG TGAGCCCGAC CATCATCTTC
TTCGACGAGC TGGACAGCCT CGCGCCTTCG CGCGGGCAGG AGATGGGGAA CAACGTCTCC
GAGCGCGTCG TCAACCAGCT GCTGACGGAG CTCGACGGGT TAGAGGAGAT GGGCGACGTG
ATGGTGATCG GCGCCACCAA CCGTCCCGAC ATGATCGACC CCGCGCTGCT GCGCTCCGGC
CGGTTCGACC GGCTCGTCAT GATCGGACAG CCCGACCAGG AGGGCCGCGA GCGGATCCTC
GAGATCCACA CGCAGGACAC GCCGCTCGCA CCCGACGTGA CCCTCCGCGA GATCGCCGAA
ATCACCGACG GCTACGTCGG CTCCGATCTG GAGGGCATCG CCCGCGAGGC CGCCATCGAG
GCGCTGCGCG ACGACGACGA CGCCGAGGAG GTCGAGATGA AGCACTTCCG GCGCGCGCTG
GAGTCGGTGC GCCCCACGAT CAACGACGAC ATCCTCGCGT ACTACGAGGA GGTCGAAGAG
CAGTTCAAGG GCGGCAGCGG CAACGCGATC CGCGACACCG GCGGCAAGAT CGGGTTCCAA
TAA
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| Protein sequence | MNEVQLEVAK AYPNDSGRGI ARLDPDTLLH LKLSPGDIIE IEGAETTAAK VWRADRQDWN
TDTVRVDGFT RQNADVGIGE RVTIRKAEAE KAEKLVLAPP EEASVQFGSD AAGMVKRQIL
KRPVVERDIV PVMSSTNHPF MRSPGQAIPL IAVDTEPDGV CLITEDTEVE LREEPISGFE
KTGSGITYED IGGLQSEIQR VREMVELPMK HPQIFSKLGI EPPQGVLLHG PPGTGKTLLA
KAVANETSAS FFSIAGPEII SKYYGESEQQ LREIFEDAKE ESPSIIFIDE LDSIAPKRED
VTGEVERRVV AQLLTMMDGL ETRGQVVVIG ATNRVDSVDP ALRRPGRFDR EIEIGVPDEV
GRKEILQIHT RGMPLSDDVS LDHLADETHG FVGADIESLT KEAAMKALRR YLPEIDLDDE
EVPPSLIDRM IVKRDDFGAA LNEVEPSAMR EVLVELPKIS WDDVGGLSEA QQQVQESVEW
PLSSPEKFDR MGVDPPKGVL LYGPPGTGKT LMAKAVANET NANFISVRGP QLLSKWVGES
EKAIRQTFRK ARQVSPTIIF FDELDSLAPS RGQEMGNNVS ERVVNQLLTE LDGLEEMGDV
MVIGATNRPD MIDPALLRSG RFDRLVMIGQ PDQEGRERIL EIHTQDTPLA PDVTLREIAE
ITDGYVGSDL EGIAREAAIE ALRDDDDAEE VEMKHFRRAL ESVRPTINDD ILAYYEEVEE
QFKGGSGNAI RDTGGKIGFQ
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