Gene Hlac_1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1704 
Symbol 
ID7400461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1722982 
End bp1723866 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content68% 
IMG OID643708772 
Producthistidine kinase 
Protein accessionYP_002566358 
Protein GI222480121 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.318661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTAGGCC GGGACTGCCG GTTCCTGCAG GGCGAGGGGA CGAACCCGGA GACCCGGGCG 
ACGCTCCGCG AGGCCATCGA CGACGAGCGG CCGGCGTCGG TCGACATCCT GAACTACCGG
TGCAACGGCC AGCAGTTCTG GAACCGGCTC ACGGTCGCCC CGATCAGCGA CGCGGACGGG
GAGGTCACTC ACTACGTCGG CTTCCAGACG GACATCACGG ACCGGAAAAT CCGCGAGCGG
CGGTTGGAGG TAATGAACCG CGTCCTCGAT CACAACCTCC GGAACAAGAT GAACCTCCTC
GCCGGGTACG CGGACCTGTT GCGGAGCGAC CTCGACGACC CGGACGCGCT CAAATCGGTC
GAAGTGATCG CCGAGACGAC CGACGACCTG ATGCGGATCG CGACGGCGGC CCGGAAGATC
GACCACACGC TCTCGGCCCC CTCGCCGGCG GCGACGAGCG CCGGGCTGCG CGGCGGGATC
TCGCAACTCG CGAGCCGGAT GCGCGATCGG TACCCCGCGG CGACGATCAC CCTCTCACTC
CCCGAGGACG ACTCGCTCGA CACGACGGTC GTCGGGCTGC CGACGGCGAT CGAGGAGGGA
GTGGAGAACG CGATCAAACA CAACGACAGC CCGAACCCCG CCGTGGACGT TCGCGTCGAG
CGACGATCGC CGGAGTGGCT CGCGGTCGAG ATCACCGACA ACGGTCCCGG CATTCCCGAC
CACGAGACCC GAGTCCTCGA CCGCGGTGAG ACGCCGTTAA CTCACGCGGA CCGACTGGGT
ATCTGGCTGA TCTACTGGGT CGTGAGCAAG GCCGGCGGCG AGTTCTCGGT CGACACGTCC
GCCGAGGGGA CCACGCTCCG ACTGGTCGTG CCCGCGAACC CCTGA
 
Protein sequence
MLGRDCRFLQ GEGTNPETRA TLREAIDDER PASVDILNYR CNGQQFWNRL TVAPISDADG 
EVTHYVGFQT DITDRKIRER RLEVMNRVLD HNLRNKMNLL AGYADLLRSD LDDPDALKSV
EVIAETTDDL MRIATAARKI DHTLSAPSPA ATSAGLRGGI SQLASRMRDR YPAATITLSL
PEDDSLDTTV VGLPTAIEEG VENAIKHNDS PNPAVDVRVE RRSPEWLAVE ITDNGPGIPD
HETRVLDRGE TPLTHADRLG IWLIYWVVSK AGGEFSVDTS AEGTTLRLVV PANP