Gene Hlac_1699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1699 
Symbol 
ID7400456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1718105 
End bp1718821 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content65% 
IMG OID643708768 
Productprotein of unknown function DUF47 
Protein accessionYP_002566354 
Protein GI222480117 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1392] Phosphate transport regulator (distant homolog of PhoU) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCG ACGCCGACTT CGGGGAACGA CTCGAGGCCC AGACCGCCAC GTACCTCGAT 
CGGATCGACG ACTGCGTCGC CCTCCTCCCG CAGGCCTTCG ACGAGTACGC GAGCGGCGGC
CCGTACCGCG AGACGGTCGA CGAAATTGCC GCCCTCGAAA GCGAGTGCGA CGACCAAGTC
AGGGAGATCA CGGGCGTCAT CACCAACGCC GGCCCGGACG ACATTGGCCT GTTGAACACC
CGGATCAACT TCAACGAGTC CGCGCTGCTC GACTTTTATA AGGAGCTCGA CGTGGTCCCG
AACCACACCG AACGGATCGT TCAGGAGGTG GCCATGATGC GGCCGGACGC GGACACCGAC
TCCTTCCGCG ACATGCGCGA GATGGCCGAT CGGATCACCA AGATGACCGC GGTCCTCGGC
GACGTGGTCG AAAGGTTCGT CCGCGGGCTT GCGCGGAGCG ACGCCACCGA GACGCTCACC
GAAGGCATCG AGGCGATCCG CGATCTGGAA AGCGAGTGCG ACGACCTCCG CAACGACGCC
ATCGAGACCG CCTTCGCCGA CACCGACATC GACCAGCCGC TCGTCTACCG AGAGCTCGCG
ATCCTGTTGG ACGAACTGGC GAACACGATC GAGGACCTCA CCGATCGGAT CGTCGTGATC
GCGAGCAAGG AGCCGGGGAT CGTGACCGAT ACGGACCCCG ACGCGGACGT GGAGTAG
 
Protein sequence
MSTDADFGER LEAQTATYLD RIDDCVALLP QAFDEYASGG PYRETVDEIA ALESECDDQV 
REITGVITNA GPDDIGLLNT RINFNESALL DFYKELDVVP NHTERIVQEV AMMRPDADTD
SFRDMREMAD RITKMTAVLG DVVERFVRGL ARSDATETLT EGIEAIRDLE SECDDLRNDA
IETAFADTDI DQPLVYRELA ILLDELANTI EDLTDRIVVI ASKEPGIVTD TDPDADVE