| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1648 |
|---|
| Symbol | |
|---|
| ID | 7399598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 1670171 |
|---|
| End bp | 1671076 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643708715 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002566303 |
|---|
| Protein GI | 222480066 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4028] Predicted P-loop ATPase/GTPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0991233 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCCGG ACCGACCAGA CGCCTTAGTG ATCCTCGTCG CCGGCGGTGC TCGCGTTGAC
GCCGGCAAGA CGACGTTCTC GACCGGGCTG GTGGCAGACC TCGCTGCCCG CGCCGGCGAC
GCGGTCGGCG TCAAACCCCG CGCCGGCAAC GACTACTGGT ACGACCACGA CGACTACCGG
ATCGCAAGCG ATTCGGGGCG GCTCTACGGG AAAGACGCGA GACGCCTCGC GGCCGCGAGC
ACGCGATCGC TGGCGAGCGT TGGGGAGCGG AGCCGTCCCG AGGCGATCAC TCCGGAGTCG
ATAAATCCCG TTCACCGGCT CTGGCGGCCG ACACCCGACC GAACCGGCAT GCTGGGTGAC
ACGGACCGGA CGTTCCTCTG CGACCGGGTG ACGACCGAGG GCGGCTCCCG GTTCGTCGTC
AACGGGGCGG CCGAGGCCGC GGGACTGCTT CCCGACGGTC TCGCCGACCG ATTCCCGCTC
GCGGAGGCAA CTCGGGTCGA CGACGTAGCG GCGTTCAACG ACGTGATGGC GGCCGACTAC
CTCCCGGCGT TCGACCGCCT CGCAGCGCGG GTCGCGGCGG CGTCGGTGCC CGTCGTCGTC
GAGTCGTACG CGGACATTGC CGGGCCGCTC CCGCGCGATG GACCGGTCAA GCCCGACGCG
GTGGCGGTCG TCGATCCGGG TCGCGCGCGA ATCTATGCCG GCGACCGATA CGCGAAGGCG
CGCGCGGTCG CGTCCGGCAG CCCGCGCGAA GGGACGATGG AGGAGCATAC CGGAACCGTA
ACGGAGATGA TCGAGCCGCT CGCGACAGTG GATCTACCGG CCTTATCCGG CGACGAACGC
GGCGACCCGG AGCGCGTCAC GGAGCGCTAC GGCCCCGCCT ACGAGATGCT GATCGACGCG
GTCTAA
|
|---|
| Protein sequence | MSPDRPDALV ILVAGGARVD AGKTTFSTGL VADLAARAGD AVGVKPRAGN DYWYDHDDYR
IASDSGRLYG KDARRLAAAS TRSLASVGER SRPEAITPES INPVHRLWRP TPDRTGMLGD
TDRTFLCDRV TTEGGSRFVV NGAAEAAGLL PDGLADRFPL AEATRVDDVA AFNDVMAADY
LPAFDRLAAR VAAASVPVVV ESYADIAGPL PRDGPVKPDA VAVVDPGRAR IYAGDRYAKA
RAVASGSPRE GTMEEHTGTV TEMIEPLATV DLPALSGDER GDPERVTERY GPAYEMLIDA
V
|
|---|
| |