| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1631 |
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| Symbol | |
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| ID | 7399580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1653535 |
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| End bp | 1654230 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643708697 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_002566286 |
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| Protein GI | 222480049 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.706458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.255836 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCC GCCACTTCCT CCGCTCGTTC GCCGCCACCG GCGTCGCTGC CGGCACGACC
GCTACGGCCG GCTGTGCCGG AGTTCTCGGC AACTCCGGTG CCGAAGGGAC GGTCCTCGGC
CCGCCGGAAC AGACCCGGGG CGACCCCGTC CACCCGATCC ACGGCGACGA GATGCCCGAG
TTCACTGTGC CGGACCCGAT CACGGGGGAA GAGATATCGA CCGAACAGTT CGAGGGCGAA
CGCGCGTTCC TGTGGACTTC GTTTTACACC AACTGCCCCG ACGGCGTCTG TCCAGCGCTG
ATCCTCCGAC TCCGCCGGGC GCAGGAGTAC GCTGCCGAAA AGGGATTCGG CGACGAGGCG
GCGTTCCTCC CGCTCACCTT CGACCCAGAG CGCGACACGT CCCAAGTCCT CCACGAATAC
GCCGGTCAGC AGGGCGTCGA TCTAGACGCC GGCAACTGGC ACTTCCTCCG TCCCGAGAGC
TACGAGGCGG GCAAGGAACT GATGATGGAC AGCTTCGGCC TGAAGATCGA GAAGACCGAC
GGCGAACGGT ACGAGAACTT GGAGTACGCG TTCCCGCACT ACGGCCTGAT CTTGCTCGTT
AATAAGCAGG GGATCGTCGA GCGGTCGTAC CCGCGAGGCC CGAGTACGGA CATCGAAGCG
CTCGTGGACG ATTTCGAACG GGTGGTCACT GCGTGA
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| Protein sequence | MDRRHFLRSF AATGVAAGTT ATAGCAGVLG NSGAEGTVLG PPEQTRGDPV HPIHGDEMPE
FTVPDPITGE EISTEQFEGE RAFLWTSFYT NCPDGVCPAL ILRLRRAQEY AAEKGFGDEA
AFLPLTFDPE RDTSQVLHEY AGQQGVDLDA GNWHFLRPES YEAGKELMMD SFGLKIEKTD
GERYENLEYA FPHYGLILLV NKQGIVERSY PRGPSTDIEA LVDDFERVVT A
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