| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1621 |
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| Symbol | |
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| ID | 7399570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1641427 |
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| End bp | 1642320 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643708687 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_002566276 |
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| Protein GI | 222480039 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.615418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGTA TGGGAATCCT CTCGCGCGCC TCCTACGTCA TCCGCTCGAA GCTGAACGCT
CTCCTCAATC GGACCGAGGA CCCGACGGAG TCACTCGACT ACTCGTACGA ACAGATGCGC
GACGAGCTCC AGGACGTCAA GCAGGGGATC GCCGATCTCA CGACCCAGAA GAAGCGACTG
GAGATTCAAA AGCGCAAGCT CGACGAGAAC GTCGAGAAGC ACAACCGACA GGCCCGCGAG
GCGGTCCAGC AGGACCGCGA CGACCTCGCG CGGAAGGCCC TCGAGAAGAA GAAATCGAAG
ATGACGCAGA TCGAGGAGCT CGAAGGACAG ATCGCGAAGT TAAACGACAC GCAAGAGCAG
CTCGTCGAGA AGAAGAACAA GCTCCAGAAC CGCATCGAGG AGTTCCGCAC GAAGAAGGAG
AGCATGAAGG CCCGCTACCA GGCCGCGGAG GCGTCCTCGC GCGTCTCGGA GGCGATGACC
GGCGTCGGCG ACGAGATGGA GGACGTGAGC CGCTCCATCG AGCGCGCCGA GGAACGCACC
GAGGATATGG AGGCGCGCGC TGAGGCGATG GACGAGCTGG AGGACTCCGG CGCCTTCGAG
GACGCGCTCT CGGACAAGGA CAGCATCGAC CGGGAGCTGG ATAGCCTCTC GACGAACAGC
GAGGTCGACG CCGAGCTGGA GACGCTGAAA GGCGAACTCG GCAAGGGCGA GCCCGCGAGC
GACGACGCCG GGGAAAGCAC CGACGAGGAG ATCGACACCG AACTGGCGGA CATCGAGTCG
GAGATCGACA GTGACGATCT CGAGGCCGAC CTCGATGGGG ACGACGACGC CGACGAGGAG
GTCGACGTGG AGTTAGAGGA GTCCGAGGTC GACGCCGACG AACAGCGGAA CTGA
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| Protein sequence | MAGMGILSRA SYVIRSKLNA LLNRTEDPTE SLDYSYEQMR DELQDVKQGI ADLTTQKKRL
EIQKRKLDEN VEKHNRQARE AVQQDRDDLA RKALEKKKSK MTQIEELEGQ IAKLNDTQEQ
LVEKKNKLQN RIEEFRTKKE SMKARYQAAE ASSRVSEAMT GVGDEMEDVS RSIERAEERT
EDMEARAEAM DELEDSGAFE DALSDKDSID RELDSLSTNS EVDAELETLK GELGKGEPAS
DDAGESTDEE IDTELADIES EIDSDDLEAD LDGDDDADEE VDVELEESEV DADEQRN
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