Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1603 |
Symbol | |
ID | 7399552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1622112 |
End bp | 1623392 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643708669 |
Product | transposase, IS605 OrfB family |
Protein accession | YP_002566258 |
Protein GI | 222480021 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0811903 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAAC AGGTCGTTAC CCGCACCTAC ACTGCTTCCA TACGGAACCA GTCTCGGGTG CAAGACGACC TTGATTCGCT CGGGTTCGCC GCCTCAAAAC TCTGGAACGT CGGACGGTGG ACGTGCAGTC GGATCTGGGA TAAAATCGAT CACATTCCCA CCCACAACGA ACTCACCACG TACCTCAAAA ACCACGAACG CTATGATGAC CTGCATTCTC AGTCAAGTCA GCGAGTCCTT CAAGAACTCG CTGAAGCGTT CAACGGCTGG TACGGCAACC GACAAAACGG AGATACGAAA GCGAACCCGC CCGGCTACCG CAAACACGGC GACGAGCACC CGCGCTCAAC AGTCACCTTC AAGCAGAAAG GCTTCAAACT CGACACTCAG TACGACCGAG TTCGACTCTC AAAAGGATCG AACCTGAAAG AGTATTGGTC GGACTTCGTA CTGTGCAAGT ACCAAACTCG CCCCGATGTT GACCTCTCCA CCGTGGAGAA CGTCCAACAA GTCAAGATTG TATGGACGGG TGACGAGTGG GAACTACACT TCGTCTGTAA GGTCGAAATA GACGTGGATG AAGCCCCCGG TGAGAAGACG GTGGGTGTTG ATCTCGGTAT CAACAACTTC GCCGCACTCG CCTACGAAGA CGGTCACAGC GAGCTGTACC CGCTTAACTG CTTGAAACAG GACGACTACT ACTTCAGCAA GCTGATTGCT CGGTGTGACA ACTCGGACTC CGAGCAGGCC ACCCGGCTGA ACCAGAAGAA GTCGGCCCGC CGAACCCACT ACTTCCACAC CCTCTCCAAG CATATCGTCC AGCGGTGTGT TGACGAGGAA ATTGGAACTA TCGTGGTGGG CGATCTCTCC GGCATCCGTG AGGATGAGGA GAACGGCGAG TCAAAGAACT GGGGCAAGCA CGGTAATCTT GATTTGCACT CGTGGGCGTT CGACCGGTTC ACCGGCCTCC TCGAATACAA AGCCGAGATG GAAGGCATCA CGTTCGAGCA AGTGTCTGAG CGGGATACCT CGAAGTCGTG TTCGTGCTGT GGCCGGAAGC ATGAAGCCAA CCGTGTTGAA CGCGGGCTGT ATGTCTGCGA TGAGTGCGGC ACAGTGGCGA ACGCAGATGT GAACGGCGCT GAGAACATTC GGCAGAAAGT ATCTCCGAGT TCACCGAATC TCTCGGTGAA TAGGAGTAAC GGCTGGTTGG CACAGCCATC GACGTTGTTG TTTGACAAGG AAACTGGTGC GTTCGCACCG CAAGAACAGG TAACGTCGTA A
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Protein sequence | MAKQVVTRTY TASIRNQSRV QDDLDSLGFA ASKLWNVGRW TCSRIWDKID HIPTHNELTT YLKNHERYDD LHSQSSQRVL QELAEAFNGW YGNRQNGDTK ANPPGYRKHG DEHPRSTVTF KQKGFKLDTQ YDRVRLSKGS NLKEYWSDFV LCKYQTRPDV DLSTVENVQQ VKIVWTGDEW ELHFVCKVEI DVDEAPGEKT VGVDLGINNF AALAYEDGHS ELYPLNCLKQ DDYYFSKLIA RCDNSDSEQA TRLNQKKSAR RTHYFHTLSK HIVQRCVDEE IGTIVVGDLS GIREDEENGE SKNWGKHGNL DLHSWAFDRF TGLLEYKAEM EGITFEQVSE RDTSKSCSCC GRKHEANRVE RGLYVCDECG TVANADVNGA ENIRQKVSPS SPNLSVNRSN GWLAQPSTLL FDKETGAFAP QEQVTS
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