Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1598 |
Symbol | |
ID | 7399547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1616397 |
End bp | 1617383 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643708665 |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_002566254 |
Protein GI | 222480017 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00288726 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGCGACG CGTCGAGCGA GACGAGCCGC GGAGAAGAGC CGGCCGGCGC CCGATTCCTC GGGGTCGAGG CGCTCGACGA GACCGTGCCA CCGGACGAGA TTCCCGAGGA GGTGCCGGGG AAATCGCGGG TGGTCGATGT CGGCGACGTC CGGCTCCACG TCGTCGAGGC CGGACCCGAA GACGGGAAGC TGCTGGTGTT GCTCCACGGC TTCCCGGAGT TCTGGTACGG CTGGCACGAG ACGATCGTGT CACTTGCCAA CGCGGGCTAC CGCGTCGTCG TCCCCGACCA GCGTGGCTAC AACCTCTCCG AGAAACCGTC CGCAGTGAGC GACTACCGTA TCGACGCGCT GGCGCGAGAC GTGGTCGGCC TGATCGACGC GTACGACCGC GAGACCGCCG CCGTGGCCGG CCACGACTGG GGCGCGGCGG TGGGGTGGTG GCTCGCGCTT CACCACGCCG ACCGCGTCTC GGAGTTCGTC GCGGTCAACG TGCCGCATCC GACCGTCTTC GAGCGCGCGC TCCGGACTTC GTGGGACCAG CGGCTCAAGA GCTGGTACGT GCTCGCGTTC CAGCTCCCGA AGCTCCCCGA GGCGGTCGCT AGCGCCGGGA ACTGGCGCCT CGCCGTGCGG GGGCTTCGGG AGTCGAGCGA TCCGGGGACG TTCAGCGGCG AAGACTTCAG ACGCTACCGT CGCGCGTGGA ACCGCGAGGG CGCGTTCGAG GCGATGGTGA ACTGGTACCG GGCGATCGTC CGCGACCGTC CGACGCCGGC GACGGAGACG GTCGAGGTCC CGACGCTCGT GATCTGGGGC GCGAAGGACC GCTTCCTTTC CACGCGACTG GCCGGCGAGA GCGTCGACCG CTGCGCTGAC GGCCGACTCC TCATCCTCGA CACGGCGACC CACTGGGTCG TCCACGAGGA GCCGCACCGG GTCGCCAAGG CGATCGCCGA CCACGCCGAC CCGCTTCCCC CGGGCGCGCG GGAGTAG
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Protein sequence | MSDASSETSR GEEPAGARFL GVEALDETVP PDEIPEEVPG KSRVVDVGDV RLHVVEAGPE DGKLLVLLHG FPEFWYGWHE TIVSLANAGY RVVVPDQRGY NLSEKPSAVS DYRIDALARD VVGLIDAYDR ETAAVAGHDW GAAVGWWLAL HHADRVSEFV AVNVPHPTVF ERALRTSWDQ RLKSWYVLAF QLPKLPEAVA SAGNWRLAVR GLRESSDPGT FSGEDFRRYR RAWNREGAFE AMVNWYRAIV RDRPTPATET VEVPTLVIWG AKDRFLSTRL AGESVDRCAD GRLLILDTAT HWVVHEEPHR VAKAIADHAD PLPPGARE
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