Gene Hlac_1598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1598 
Symbol 
ID7399547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1616397 
End bp1617383 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content71% 
IMG OID643708665 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002566254 
Protein GI222480017 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00288726 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCGACG CGTCGAGCGA GACGAGCCGC GGAGAAGAGC CGGCCGGCGC CCGATTCCTC 
GGGGTCGAGG CGCTCGACGA GACCGTGCCA CCGGACGAGA TTCCCGAGGA GGTGCCGGGG
AAATCGCGGG TGGTCGATGT CGGCGACGTC CGGCTCCACG TCGTCGAGGC CGGACCCGAA
GACGGGAAGC TGCTGGTGTT GCTCCACGGC TTCCCGGAGT TCTGGTACGG CTGGCACGAG
ACGATCGTGT CACTTGCCAA CGCGGGCTAC CGCGTCGTCG TCCCCGACCA GCGTGGCTAC
AACCTCTCCG AGAAACCGTC CGCAGTGAGC GACTACCGTA TCGACGCGCT GGCGCGAGAC
GTGGTCGGCC TGATCGACGC GTACGACCGC GAGACCGCCG CCGTGGCCGG CCACGACTGG
GGCGCGGCGG TGGGGTGGTG GCTCGCGCTT CACCACGCCG ACCGCGTCTC GGAGTTCGTC
GCGGTCAACG TGCCGCATCC GACCGTCTTC GAGCGCGCGC TCCGGACTTC GTGGGACCAG
CGGCTCAAGA GCTGGTACGT GCTCGCGTTC CAGCTCCCGA AGCTCCCCGA GGCGGTCGCT
AGCGCCGGGA ACTGGCGCCT CGCCGTGCGG GGGCTTCGGG AGTCGAGCGA TCCGGGGACG
TTCAGCGGCG AAGACTTCAG ACGCTACCGT CGCGCGTGGA ACCGCGAGGG CGCGTTCGAG
GCGATGGTGA ACTGGTACCG GGCGATCGTC CGCGACCGTC CGACGCCGGC GACGGAGACG
GTCGAGGTCC CGACGCTCGT GATCTGGGGC GCGAAGGACC GCTTCCTTTC CACGCGACTG
GCCGGCGAGA GCGTCGACCG CTGCGCTGAC GGCCGACTCC TCATCCTCGA CACGGCGACC
CACTGGGTCG TCCACGAGGA GCCGCACCGG GTCGCCAAGG CGATCGCCGA CCACGCCGAC
CCGCTTCCCC CGGGCGCGCG GGAGTAG
 
Protein sequence
MSDASSETSR GEEPAGARFL GVEALDETVP PDEIPEEVPG KSRVVDVGDV RLHVVEAGPE 
DGKLLVLLHG FPEFWYGWHE TIVSLANAGY RVVVPDQRGY NLSEKPSAVS DYRIDALARD
VVGLIDAYDR ETAAVAGHDW GAAVGWWLAL HHADRVSEFV AVNVPHPTVF ERALRTSWDQ
RLKSWYVLAF QLPKLPEAVA SAGNWRLAVR GLRESSDPGT FSGEDFRRYR RAWNREGAFE
AMVNWYRAIV RDRPTPATET VEVPTLVIWG AKDRFLSTRL AGESVDRCAD GRLLILDTAT
HWVVHEEPHR VAKAIADHAD PLPPGARE