Gene Hlac_1596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1596 
Symbol 
ID7399545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1614132 
End bp1614554 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content62% 
IMG OID643708663 
ProductGtrA family protein 
Protein accessionYP_002566252 
Protein GI222480015 
COG category[S] Function unknown 
COG ID[COG2246] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00834941 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCCGGT CGGCCCTCCG CAACCTCGTT AGCGGACCGT TCGCCGTCCA GATGCGCCGG 
TTCGTCATCG TCGGCGCGTT CACCGCGGGG ATACAGATGA GTCTGTTGTG GCTGTTCGTC
GATATGGCCG GGGTGAACTA CCTGCTCGGT GCGACGATCG CGATCGAGAT CACGATCGTC
CTCTCGTACG TGCTCAACAA CGCGTGGACG TTCCAAGCGA GTCAGAACAC CGGCACGACC
GAGTACCTCC GCGGCCTACT CAAGACCAAC TTGGTCCGCG GGACGGCGAT CCCGATCCAG
CTCGGCGTCC TCTACGCGCT CGTGGAGTGG GGAGAGATCA TGTACCTCGT CGCCAACGCG
ATAGCCATCT TCCTCAGCGG GCTCTACCGC TTCGTCCTCG ACCGACAGTG GACGTGGGGA
TGA
 
Protein sequence
MIRSALRNLV SGPFAVQMRR FVIVGAFTAG IQMSLLWLFV DMAGVNYLLG ATIAIEITIV 
LSYVLNNAWT FQASQNTGTT EYLRGLLKTN LVRGTAIPIQ LGVLYALVEW GEIMYLVANA
IAIFLSGLYR FVLDRQWTWG