Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1596 |
Symbol | |
ID | 7399545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1614132 |
End bp | 1614554 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643708663 |
Product | GtrA family protein |
Protein accession | YP_002566252 |
Protein GI | 222480015 |
COG category | [S] Function unknown |
COG ID | [COG2246] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00834941 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCCGGT CGGCCCTCCG CAACCTCGTT AGCGGACCGT TCGCCGTCCA GATGCGCCGG TTCGTCATCG TCGGCGCGTT CACCGCGGGG ATACAGATGA GTCTGTTGTG GCTGTTCGTC GATATGGCCG GGGTGAACTA CCTGCTCGGT GCGACGATCG CGATCGAGAT CACGATCGTC CTCTCGTACG TGCTCAACAA CGCGTGGACG TTCCAAGCGA GTCAGAACAC CGGCACGACC GAGTACCTCC GCGGCCTACT CAAGACCAAC TTGGTCCGCG GGACGGCGAT CCCGATCCAG CTCGGCGTCC TCTACGCGCT CGTGGAGTGG GGAGAGATCA TGTACCTCGT CGCCAACGCG ATAGCCATCT TCCTCAGCGG GCTCTACCGC TTCGTCCTCG ACCGACAGTG GACGTGGGGA TGA
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Protein sequence | MIRSALRNLV SGPFAVQMRR FVIVGAFTAG IQMSLLWLFV DMAGVNYLLG ATIAIEITIV LSYVLNNAWT FQASQNTGTT EYLRGLLKTN LVRGTAIPIQ LGVLYALVEW GEIMYLVANA IAIFLSGLYR FVLDRQWTWG
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